Vibrio parahaemolyticus RIMD 2210633: VP2454
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Entry
VP2454 CDS
T00120
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpa03016
]
VP2454
Enzymes [BR:
vpa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VP2454
Transfer RNA biogenesis [BR:
vpa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VP2454
Prokaryotic type
VP2454
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAC60717
UniProt:
Q87M04
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All DBs
Position
1:complement(2576054..2576998)
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AA seq
314 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVDVTLEKLEACIEKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIILHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTAVAKYPYEKMVTLEQLNELLEQAHREEIAPRELLDPLL
MPMDTAVEDLPEVNLIPELADMVQHGQPVQVLGAPEQGFLRLTMGEEHLFIGVGEMNDDG
KIAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggtgttatcttgttggataaaccaaca
ggtatctcttccaatgatgcactgcaaaaagtaaagcgaatctactttgctgagaaagcg
ggtcacactggtgcgttggaccctctagcgacgggtatgttgccgatctgtttaggtgaa
gcaaccaagttttctcagttcctactggattcagacaaacgctatcgcgtgatcgcgaaa
cttggcgaacgtactaacacttcagactctgatggtgaagtggttgaaacgcgtccagta
gatgtgactctcgagaaactagaagcgtgtattgagaagttccgtggcgaatctgaccaa
gtgccttcgatgttttctgctttgaaataccaaggcaaacctctgtacgagtacgctcgc
aaaggtatcgaagttccacgtgagtctcgtaaaattacggtatacgaaatcattcttcac
cgttttgaaggtgatgaagttgagatggaggtgcactgttcaaaaggcacttacattcgt
actatcgtcgatgacttgggcgaaatgctcggttgtggtgctcacgtaacgatgctgcgc
cgcacagctgtagccaagtacccttacgagaaaatggtgactcttgagcagcttaatgag
ctacttgagcaagctcatcgtgaagaaatcgctcctcgcgagttactcgatccactgctt
atgccaatggacactgcagttgaagacttaccagaagtaaacctaattcctgaattagca
gatatggttcagcatggccaaccggttcaagtattaggtgcaccagagcagggatttctg
cgcctgactatgggcgaagagcatttgttcatcggtgttggtgaaatgaacgatgatggt
aagatcgcaccaaaacgtttagtcgttttccgcgacgaagagtaa
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