Vibrio parahaemolyticus RIMD 2210633: VP2557
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Entry
VP2557 CDS
T00120
Name
(GenBank) putative hydrogenase subunit
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpa03016
]
VP2557
Enzymes [BR:
vpa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VP2557
Transfer RNA biogenesis [BR:
vpa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VP2557
Prokaryotic type
VP2557
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAC60820
UniProt:
Q87LQ4
LinkDB
All DBs
Position
1:complement(2701190..2702233)
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AA seq
347 aa
AA seq
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MSDILSSLAYLTGKPVASAKIKAQPEHFQVREDLGFAFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGETPDFSTFLAQYPSIEILATDRH
NKKLRPGDLIGNEFVVTLSEVTDMADVEQRLEKVKQVGVPNYFGSQRFGNDGNNLDEARR
WGRENVRTRNQNKRSMYLSAARSWIFNRIVSARLENGVFDKFIDGDIAQTSQGLLAVDAS
NLADMQNKLALSEVEITAALAGDNALPTQADALALEQPFIDEEPDLMALIRGNRMRHDRR
EIALKPKDLAWNVEGNNITLTFSLDAGSFATSIVRELVNEVKVEREY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcctcattggcttacctcacaggcaagccagtcgcatcagcaaaa
attaaagcgcaaccagaacattttcaggttcgtgaagatttgggttttgccttcacggga
gaaggtgaacacttaatggtgcgcattcgaaaaacaggtgagaacaccagtttcgtcgct
aacgagctagcgaaagcttgtggtgttaagtctaaagacgttagttgggcaggcctgaaa
gatcgccacgcagtaaccgaacaatggctaagtgttcatctgcctaaaggtgagactcca
gatttttcgacatttttggcgcaatacccaagtattgaaattctggcgaccgatcgacac
aacaaaaaactgcgtcctggtgacttaatcgggaacgagtttgtggttaccttgtctgaa
gtgacagatatggcggatgtagagcaacgccttgaaaaagttaaacaagttggtgtgcca
aactactttggtagccaacgctttggtaacgatggaaataacctcgacgaagcccgtcgt
tggggacgagaaaacgttcgtacgcgtaaccaaaacaaacgcagcatgtacctgtctgcc
gcgcgttcatggatcttcaaccgcatcgtttctgctcgtctagaaaatggtgtgtttgat
aaattcatcgatggtgacatcgcacagacatcacaaggattgttggctgttgatgcgagt
aaccttgctgatatgcaaaacaagcttgcattgagtgaagttgagatcactgccgcttta
gcgggtgataatgcgttaccgacccaagctgatgcacttgcattagaacaaccatttatt
gatgaagaacctgatttaatggctctgatccgtggtaatcgtatgcgtcacgatcgtcgt
gaaattgcactcaaaccaaaagacttagcttggaacgttgaaggtaacaatattacgttg
accttctcactcgatgcaggctcttttgccacatccattgttcgtgagttggtgaatgag
gtcaaagtagaaagagaatactaa
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