Vibrio parahaemolyticus RIMD 2210633: VP2572
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Entry
VP2572 CDS
T00120
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpa03019
]
VP2572
03009 Ribosome biogenesis [BR:
vpa03009
]
VP2572
03036 Chromosome and associated proteins [BR:
vpa03036
]
VP2572
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
VP2572
Messenger RNA biogenesis [BR:
vpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VP2572
Ribosome biogenesis [BR:
vpa03009
]
Eukaryotic type
90S particles
RNase
VP2572
Prokaryotic type
rRNA processing factors
VP2572
Chromosome and associated proteins [BR:
vpa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
VP2572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BAC60835
UniProt:
Q87LN9
LinkDB
All DBs
Position
1:complement(2718290..2718967)
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AA seq
225 aa
AA seq
DB search
MNSPIDKLERKLGYQFKDAGLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFP
KVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDIEKVRSIVLSWYNSRLEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaattgataaactagagagaaagctcggctaccaatttaaggatgctggg
cttatcaacttggcgctgactcaccgcagcgccaacagcaagcacaatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcatcgctgatgatctgtaccatcgttttccg
aaagtgaacgagggtgacatgagccgtatgcgcgctactctggtacgtgggcacacattg
gcggaactgggtcgtgaattcgatctaggagattatttaaaattaggtccaggtgaattg
aagagtggcggtttccgccgagactctattctagccgatgcggtagaagccattattggt
gcgatttacctagatagtgatattgagaaagtacgcagtattgttctgagttggtacaac
tcgcgtcttgaagccatcaaacctggcgtatcacaaaaagacccaaaaactcgcctacaa
gagttcctgcaaggcagaagaaaaccgctgcctgtctacacagtgactaatattaaaggt
gaagcgcacaaccaagagtttacggttgagtgcgaagtagcaggtgtggataagcctgta
atcggtaaaggcaccagccgccgcaaggcagaacaggcggcagcagaaacagcactagag
caattaactaatggctga
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