Vibrio parahaemolyticus RIMD 2210633: VP2628
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Entry
VP2628 CDS
T00120
Name
(GenBank) membrane-bound lytic murein transglycosylase C
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
VP2628
Enzymes [BR:
vpa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VP2628
Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VP2628
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mltc_N
SLT
SLT_4
SLT_2
Motif
Other DBs
NCBI-ProteinID:
BAC60891
UniProt:
Q87LI4
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All DBs
Position
1:2768846..2769985
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AA seq
379 aa
AA seq
DB search
MKKIAFIATALLLAGCSREFVEKIYDVNYEPTNRFANNLAELPGQFEKDTAALDALINSF
SGNIKKRWGQREVKFAGKSNYVKYIDNYLSRAEVDFQKGLITIETVSPTEPQKHLKNAII
TTLLTPDDPANVDLFSSKEIKLEGQPFLYKQVLDQDKKPIQWSWRANRFADYLIANNIKT
KDVDFKKAYYVEIPMVEDHFSQRSYQYADIVRRASKKYDIPEDLIYAIIKTESSFNPYAV
SWANAYGLMQVVPKTAGRDVFKLVKNKSGQPSPEYLFNPENNIDTGTAYFYILKNRYLRE
VQHPTSLEYSMISAYNGGTGGVLNTFNRSDRKRAMRDLNSLQPNQVYWALTKKHPNAEAR
RYLEKVTNFKKEFNSEHTL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaattgcttttattgccaccgctctcttattggcaggctgtagtcgtgaattc
gtcgaaaaaatttatgacgtgaactacgagccaaccaaccgctttgcaaacaacctagca
gagctaccaggccagtttgaaaaagataccgccgcactcgatgcgttgatcaatagcttc
tcaggcaatatcaaaaagcgttggggacaacgtgaagtgaagttcgcaggtaaaagtaac
tacgttaagtacatcgacaattatttaagtcgggcagaagtggatttccagaaaggtctt
atcactatcgagaccgtttctccgaccgaaccacaaaaacacttgaagaacgcgatcatc
accacattgctaacgccagatgatccagcaaacgtcgacttgttctcatcgaaagagatc
aaactcgaaggccaaccctttttgtacaaacaggtgctcgatcaagataaaaagcccatt
caatggtcatggcgcgcgaatcgcttcgctgactatctgattgccaataacatcaaaacc
aaagatgtagactttaaaaaagcgtattacgttgagattccaatggtagaggatcacttc
tctcagcgtagttaccaatacgcggatatagtgcgtcgcgcgtcaaaaaaatacgacatt
cctgaagatctgatttacgccatcatcaaaaccgagagcagttttaacccttacgcagta
agttgggccaatgcttatggattgatgcaagtagtgcctaaaaccgctggtcgtgatgta
tttaagctcgtaaagaacaaatcaggacaacctagcccagagtatttgttcaacccagaa
aacaatattgacacaggaaccgcctacttctacatcctcaaaaaccgttatttacgcgaa
gttcagcatccaacttcgttagagtacagtatgatttccgcttacaacggtggaactggt
ggtgttttaaacacatttaatcgcagtgaccgaaaacgcgcgatgcgagatctcaattct
ttgcaacccaaccaagtttattgggcgctaactaagaaacatccgaacgctgaagcgcgt
cgttacctagaaaaagttacaaatttcaaaaaggaatttaactctgagcacactttgtaa
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