Vibrio parahaemolyticus RIMD 2210633: VP2642
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Entry
VP2642 CDS
T00120
Name
(GenBank) putative permease
KO
K11720
lipopolysaccharide export system permease protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VP2642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VP2642
Transporters [BR:
vpa02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
VP2642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
GatC
Motif
Other DBs
NCBI-ProteinID:
BAC60905
UniProt:
Q87LH0
LinkDB
All DBs
Position
1:complement(2793544..2794614)
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AA seq
356 aa
AA seq
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MFKILDLYIGRTIISTTALVLATFVGLSGIIKYVEQLRKVGRGVYDLTHALYFVLLSVPR
DVEMFFPMAALLGALIGLGMLASSSELVVMQAAGFSKLDIGLSVLKTAVPLMLIVMTLGQ
WGAPEAQKMARDLRSFALSGGSIVSVRAGVWARDANDFIFIGKVEDDKLYALNMWRFDDD
KNLEKVIFAEEVDYQQDNNWLMRDVQITNMQDENVISKQEMDQMEWHTSLAPDKLAVVTV
KPEELSLSGLYDYVTYLKASEQDASRYELAFWRKLTQPLSIAVMMLMALSFVFGPLRSVT
MGARVLSGVVAGFTFYISSEFFGPLTLVYGIPPIFGALAPSLAFLAIAVALLRRKL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaaaatcttagacctttacatcggtagaaccatcatctctaccacagccttggtt
ctggcaacgtttgttggcctatcgggtatcatcaaatacgtggaacagctacgaaaagtg
gggcgtggtgtgtatgacctgacgcacgctttgtatttcgttttgttgagcgtgcctcgt
gacgttgaaatgtttttcccaatggcagcattgctgggtgcgctgattggtttgggtatg
ctggcgtcgagctctgagcttgtggtcatgcaagcggcgggtttctccaagctggatatc
ggtttgtccgtgctaaaaacggccgttccattgatgcttatcgtgatgactttaggtcaa
tggggggctccagaagctcagaaaatggcgcgtgatttgcgatcttttgcattgtctggc
ggcagcatcgtttcggttcgtgctggggtttgggctcgtgatgctaacgacttcatcttc
atcggtaaagtggaagatgacaagttgtatgcgttgaacatgtggcgctttgatgatgac
aagaacttagaaaaagttatcttcgctgaagaagtggattaccaacaagataacaattgg
ttgatgcgtgacgtacaaatcaccaacatgcaagacgaaaacgtgatttccaaacaagag
atggatcaaatggaatggcacacgtcgttggctcctgacaagctagccgtggtgacagta
aaaccagaagagctctctctgagcggcttgtatgattatgtgacgtatttgaaagcatca
gagcaagatgcttcacgttacgaactcgcattttggcgtaagctgacgcagcctttgtcg
attgccgtaatgatgttgatggcattgtctttcgtctttgggccgctgcgaagcgtcaca
atgggggcgagagttttatctggcgttgtggctggtttcactttctatatctccagcgag
ttcttcgggccattgactctggtgtatggcataccgccgatatttggtgccttagccccg
agcttagcgtttttggcgattgcggtggcgttgctgagaagaaagctataa
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