Vibrio parahaemolyticus RIMD 2210633: VP2682
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Entry
VP2682 CDS
T00120
Name
(GenBank) RNA polymerase-associated protein HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpa03021
]
VP2682
Transcription machinery [BR:
vpa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VP2682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
RelB-like
Motif
Other DBs
NCBI-ProteinID:
BAC60945
UniProt:
Q87LD0
LinkDB
All DBs
Position
1:complement(2829447..2832356)
Genome browser
AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALTNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADAITSLF
SGEKLPDEAKNQITELLSEQDVEPLFRIIESNSDEEAKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPTRNVHLMPMDIPQQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKVKEKRGEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSDALIEILASGD
TSTLDEIIEESAKLNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKIESTDGDTNLVTFA
LSLFDTIGLNQDDKGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELIYAVDAQAPKRSGITRFLPKT
PIRLMMDSRGNDLSAQVEFEGFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDVLVEEKV
EAVRKQAQQDMQQSLNTELERLQALKAVNPNIRDEEIEAIEAQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcagcgctggattagcgatacggaaagcgatttaggtttaggt
accgtagtagcaatggatgctcgtactgtgacattgatgtttgcagcgtcagaggaaaac
cgagtttacgcacgtaacgatgcacctgttacccgagtaacgtttaacgtcggtgatgtc
atcgattgccaagaaggttggtctctgaaagttgaagaagtactggaagatgaaggtctg
tacacctatttcggtactcgtgaagacacgcaagaaaccgcagttgttctgcgtgagatt
ttccttagcaaccaaattcgtttcaacaaacctcaagataagttgtacgccggtcaaatc
gaccgcatggacaacttcgttcttcgttaccgtgcgctaaccaaccagtttgaacagcac
aaaagcccaatgcgtggcttgtgtggcatgcgagcaggtttgatccctcatcagctttat
atcgcgcacgaagtcggtcgccgtcacgcgccacgcgttttgttggcggatgaagtaggg
ttgggtaagaccatcgaagcgggcatgatcatccaccagcaagtgctgtctggtcgtgct
gaacgcattttgattgtggtgcctgaaacactgcaacaccaatggctagttgagatgatg
cgtcgtttcaacctgcatttctctatcttcgatgaagagcgttgtattgaagcattcgcg
gacgctgaaaacccatttgatactcagcaatacgtgctgtgttcactcgatttcctacgt
aagagccgcaagcgttttgaacaagcgctagaaggcgaatgggatctgcttgttgtcgat
gaagcgcatcaccttgagtggagccaagacaaaccaagccgtgaataccaagtggtagaa
ggcttggctgaacgtactccgggcgtgttgctactgacggcaacaccagaacagcttggt
cgtgaaagccactttgctcgtctacgcctgctggatcccgatcgtttctatgattatgaa
gcgttcgtcgaggaagaagagcaatacgcgcctgtagcggatgcgattacttcactattc
tcaggcgaaaagctgcctgatgaagcgaaaaaccagatcactgagctgttgtctgaacaa
gacgtagaaccacttttccgcattatcgaaagcaacagtgatgaagaggcgaaagcatca
gcgcgccaagagcttatcgataacctaatggaccgtcacggtacggggcgtgttttgttc
cgtaacacgcgtgcggcaatcaaaggtttcccaacgcgtaatgtgcatcttatgccgatg
gatatcccacagcagtacaccacgtcaatgcgtgtggcagggatgattggcggtaagatg
agttcagaagcgcgtgcgatgaagaacctgtatccggaagaaattttccaagaatttgaa
ggcgatgacgcaagctggtggcagtttgactcacgtgtgaactggctacttgaaaaagta
aaagagaaacgcggcgagaagattctcgtgattgcttctcgtgcgagcacggcattgcaa
ttggagcaagcgctgcgtgaacgcgaaggcatccgtgcgacggtcttccacgaaggcatg
tcgattcttgagcgcgacaaagctgcggcttactttgcgcaagaagaaggcggtgcacag
gttctgatctgtagcgaaatcggttctgaaggtcgtaacttccaatttgccaaccaattg
gtgatgttcgacttgccattcaacccagacttgcttgaacaacgtattggtcgtttggac
cgtatcggtcaaaaccgagatatcgacattcatgttccttacctgaaaggcacatcgcaa
gcgatcctagcgcgttggttcgatgaaggtttgaacgcctttgcggaaacctgcccgaca
ggtcgtgcggtttatgacaagtactcagacgccctgattgagattctggcgtcaggagat
accagcactctggatgagatcatcgaagaatcagcgaagctgaacaaagaattgaaatcg
caactagagcaaggtcgtgaccgcttgctagaaatgcactctaatggcggcgaaaaagct
cagcaaatcgttgagaaaattgaatcaaccgatggtgatacaaacctagtcacgtttgcg
ctttctctgtttgatacgattggtttgaaccaagacgacaaaggcgaaaatgcactggtg
gtgacaccatcagagcacatgatggtgccaagctaccctggtttgccatacgaaggtgcg
acgatcacttttgatcgcgataccgcgctttctcgtgaagacatgcacttcatcagttgg
gaacacccaatgatccaaggtggtatcgatcttctgatgagtgaaggtgtgggtacttct
gcggtatctttgttgaaaaacaaggcgttgccagttggtacgattctgcttgaactgatt
tacgcggtagatgcgcaagcaccaaaacgcagcggtatcactcgcttcttaccgaaaacg
ccaatccgtctgatgatggactcgcgtggtaacgatctatcggctcaagtggagtttgaa
ggtttcaaccgtcaacttagcccagtaaaccgtcatcttggcagcaagctggtgacgtct
gtgcaaaaagacgtgcaccgtttgattgaagcgggtgatgtgctggttgaagagaaagtg
gaagccgttcgtaagcaagcacagcaagatatgcagcaaagcttgaatacggagctagag
cgtttacaagccttgaaagcggtgaacccaaacattcgtgatgaagagattgaagcgatt
gaagcacaaatcaaagagctgactggttacatcaatcaagctcaagtgcagctcgactcg
ctccgtctgatcgtggtgagccacaactaa
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