Vibrio parahaemolyticus RIMD 2210633: VP2701
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Entry
VP2701 CDS
T00120
Name
(GenBank) MSHA biogenesis protein MshE
KO
K12276
MSHA biogenesis protein MshE
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VP2701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpa02044
]
VP2701
Secretion system [BR:
vpa02044
]
Type II secretion system
MSHA pilus biogenesis protein
VP2701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
nSTAND_NTPase5
AAA_16
AAA_22
AAA_11
AAA_30
AAA_29
AAA_23
AAA_19
nSTAND3
Rad17
NTPase_1
ATPase_2
ResIII
AAA_18
AAA_7
AAA_14
Zeta_toxin
DUF2949
SRP54
cobW
AAA
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAC60964
UniProt:
Q87LB1
LinkDB
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Position
1:complement(2854794..2856518)
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AA seq
574 aa
AA seq
DB search
MKIQLRKRLGDLLVEEGIVSEDQIQQALSAQRSTGQKLGDALIDLGFITEKQMLEFLSQQ
LGLPLIDLGRAPVDADAVQILPEVHARRLRAMVVARNGDTLRVAMSDPADLFTQESLMNL
LGEYNLEFIIASERQLISSFDRYYRRTKEIASFAEQLQAEHQDVQSFDYGIDEADSEEVT
VVKLVNSMFEDAVQVGASDIHIEPDDKVLRLRQRVDGVLHETILNEVNIASALVLRLKLM
AHLDISEKRLPQDGRFNIKVRGQSIDIRMSTLPTQYGESVVMRLLNQSSGLRPLEESGLP
PELLARLRRQLSRPHGMILVTGPTGSGKTTTLYGALSELNEPGKKIITAEDPVEYRLPRI
TQVQINSKIDLTFSRVLRTFLRQDPDIILIGEMRDQETVEIGLRAALTGHLVLSTLHTND
AVDSALRMIDMGAPGYLVASAVRAVVAQRLVRRVCPDCKTQDHLDESRQQWLAGRFPNQV
GVTFHKGAGCQNCNLTGYRGRIGVFEMLELEHEMMDKLRANDAVGFAQAARRSENYKPLL
ASAMELALQGAVSLDEVMTLGEGDASGKTDPIFM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcagttgagaaaacgcttaggtgacctacttgttgaagaaggtatcgtatcg
gaagatcaaatccagcaagctctatccgctcagcgcagtaccggacaaaaattaggtgat
gccctgattgatctcgggtttattaccgaaaagcaaatgctggagttcttgtctcagcaa
cttggattaccgttgatcgatcttggacgcgctccagtggatgcggatgcggtgcaaata
ctgccagaagtgcatgctcgtcgtttacgtgcaatggtggtggctcgtaatggtgacact
ctacgtgttgcgatgagtgatccggcggatctgtttacccaagagtctttaatgaacttg
ctaggtgagtacaaccttgagttcatcattgcctctgagcgtcagttgatcagcagtttc
gaccgttactaccgccgtaccaaagagatcgcgtcctttgctgagcagttacaagccgag
caccaagacgtacaaagctttgactatggcatcgatgaagccgacagtgaagaagttacc
gttgtaaaactggttaattcgatgtttgaggacgcggtgcaagttggtgcatcggatatc
catatcgaaccagacgataaagtcctgcgtttacgccagcgtgtcgacggtgtgctacat
gaaaccattctgaacgaagtgaacatcgcttcagcattggtattacgccttaagttgatg
gcgcacttggatatttctgagaagcgtctgccacaagatggtcgcttcaacatcaaagtt
cgtggccaatcgattgatattcgtatgtcgacgttaccaactcagtatggtgaatcggtt
gtaatgcgtctgcttaaccagtcgtcaggtttacgtccattagaagaatcgggtttaccg
cctgagctactggcgcgcttgcgtcgtcagttatctcgtcctcatggcatgattttggta
accggccctacgggatcgggtaaaaccacgacactttacggcgcgttgagtgagctcaat
gaaccgggtaaaaagatcatcaccgcagaagatccggtggaataccgtttaccacgtatc
acgcaagtacagatcaacagcaagatcgacctgacattttcacgcgttctacgcaccttc
ttacgccaagacccagacatcattttgattggtgagatgcgtgaccaagagacggtagag
attggcttgcgagcagcattaacaggtcacttagtattgagtaccttgcacaccaacgat
gcggtcgacagcgcactgcgtatgatcgacatgggggcgccaggctatctcgttgccagt
gccgtgcgtgccgttgtggctcagcgattggttcgccgtgtttgtccagattgtaaaacc
caagatcatctcgatgagtcgcgtcaacaatggttagcagggcgttttccaaatcaagtt
ggggtgactttccataaaggggctggttgtcaaaactgtaacttgacggggtatcgaggt
cgaatcggtgtgtttgaaatgcttgagctggaacatgagatgatggacaagctgcgtgcg
aatgatgcggttggctttgcacaagcggctcgacgttcagaaaactacaaaccgcttctt
gcctcagcaatggagcttgcactgcaaggtgctgtgagcctggatgaagtgatgaccctc
ggcgagggtgacgcttcgggtaaaactgatcccattttcatgtag
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