Vibrio parahaemolyticus RIMD 2210633: VP2820
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Entry
VP2820 CDS
T00120
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VP2820
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
VP2820
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpa03036
]
VP2820
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
VP2820
Peptidoglycan biosynthesis and degradation proteins [BR:
vpa01011
]
Peptidoglycan biosynthesis and degradation
Amidase
VP2820
Chromosome and associated proteins [BR:
vpa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VP2820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
AMIN
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
BAC61083
UniProt:
Q87L04
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Position
1:complement(2984324..2986039)
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AA seq
571 aa
AA seq
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MLSLSNFRAVATFVATFLLIIPNVAFANVVKSFRVWPSPDETRVVIDLGSEADYSYFSLS
GPDRLVVDMKDTTMQAKLPVTVSDSPVLKLVRKSSPPEKGTYRLVFELKKNVQAELFKLS
PTPGGQYGHRLVIDLPHGKKTATTAAKPSKPATTSKDMSTVQRAQEVLIVIDPGHGGEDP
GSIGPSRRKYEKDAVLSISRKLAAQLDATPGIKTRMTRTGDYFVNLNRRVAFARENDAHL
LISVHADAFTSPQPRGGSVFVLNTRRANTEIARWVENHEKQSELLGGSGNAFVTNTKDRN
VNQTLLDLQFSHSQKEGYKLATEILGEMGRVAHLHNTKPINTSLAVLRSPQIPSVLVETG
FISNPTEEKLLFQRAHQDKLAQAISKAVVKYLKDNPPEGTVFSPSSKPMVHIVKRGESLS
VIANKYGTNSKALMAENKLKSTSLAVGQKLRIPSAGKIQVPSKPITIETETITHIVKSGE
FLGKIASHYKVKLSDIRRENNLKSDTLWVGQKLKITVAVKDKPIRKHKVARGEYLGKIAS
KYGVSVASIRQANNLRSDELAVGQVLIIPNK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtctttcaaattttagagcagtggcgacgtttgtcgccacttttctccttatc
atccccaatgtagcatttgctaacgtcgttaaaagtttccgagtgtggccttccccagat
gagactcgtgttgtcatcgatttaggctcggaagctgactattcctatttttctctgtca
gggccggaccgtcttgtggtggatatgaaagacaccaccatgcaagctaaattgccagtg
accgtttctgatagcccagtgcttaaattggtgcgtaaaagctcgcctccagagaaaggc
acctatcgccttgtttttgaattaaagaaaaacgttcaggcagagttattcaaactcagt
ccaacgccgggcggccaatatgggcatcgtttggtgattgacctgccacacggtaagaaa
accgcgacaacagcagcgaaaccaagcaaaccggcgacaaccagcaaagacatgagtacc
gtacagcgtgctcaagaagtattgatcgtgatcgatcctggtcatggtggtgaagaccct
ggctcaattggtccatctcgtcgcaagtatgaaaaagacgcggtactgagcatttctcgt
aagcttgcagcgcaacttgatgcgacgccgggaatcaaaacgcgcatgacgcgtaccggt
gactactttgttaacttaaaccgccgtgttgcatttgcccgcgaaaatgacgcgcacctg
ttaatctcagttcacgcggatgcgttcacatcaccacaacctcgtgggggatcggtattc
gtattgaatacgcgtcgcgcaaacactgagattgctcgttgggttgagaaccacgagaaa
cagtccgagttgctcggtggttctggcaatgcatttgtcacgaacacgaaagaccgcaac
gtgaaccaaactttgctcgatctccagttcagtcattcgcaaaaagaaggctacaagttg
gcgaccgaaattttgggtgaaatgggacgcgtcgcgcatctacacaacaccaagccaatc
aacactagtctggcagtattgcgttcgccacaaattccatcggtccttgtagagacaggg
tttatctctaacccaacagaagagaaactgctgttccaacgcgcgcaccaagataagtta
gcgcaggctatctctaaagcggtggttaaatatctaaaagataacccacctgaaggcacg
gtgttctcaccttcctctaaaccaatggtgcacattgttaagcgtggtgaatcgctgtct
gtgattgcgaataaatacggtactaactcgaaagcgttgatggctgagaacaagttgaaa
tcgaccagcttagcggttggacaaaaactgcgtattccgtcagctggcaagatccaagtg
ccaagcaagcctattacaatagagactgaaacgattactcatatcgttaaatcgggtgag
ttcttaggtaagatcgcaagtcactataaagtgaagctgtcggatattcgtcgtgagaac
aacttaaaatccgataccttatgggttggtcaaaaacttaagatcaccgtagcagtgaaa
gataaaccgattcgcaagcacaaagtcgcgcgaggggaataccttggtaagattgcgtcc
aaatatggcgtgagtgttgcgagtattcgccaagcaaacaacttgcgctcggacgagctt
gctgttgggcaagtcctgatcattccaaacaaataa
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