Vibrio parahaemolyticus RIMD 2210633: VP2851
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Entry
VP2851 CDS
T00120
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VP2851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpa03019
]
VP2851
03110 Chaperones and folding catalysts [BR:
vpa03110
]
VP2851
03029 Mitochondrial biogenesis [BR:
vpa03029
]
VP2851
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpa04147
]
VP2851
Enzymes [BR:
vpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VP2851
Messenger RNA biogenesis [BR:
vpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VP2851
Chaperones and folding catalysts [BR:
vpa03110
]
Heat shock proteins
HSP60 / Chaperonin
VP2851
Mitochondrial biogenesis [BR:
vpa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VP2851
Exosome [BR:
vpa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VP2851
Exosomal proteins of other body fluids (saliva and urine)
VP2851
Exosomal proteins of breast cancer cells
VP2851
Exosomal proteins of colorectal cancer cells
VP2851
Exosomal proteins of bladder cancer cells
VP2851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAC61114
UniProt:
Q9L7P5
LinkDB
All DBs
Position
1:complement(3018269..3019912)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEQLKELSVECNDTKAIAQVGTISANSDASVGNIIAEAMERVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVELENPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLELEKVTLEDLGQAKRVSITKENSTIIDGAGEEAMIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKIVDLEGDNEEQNVGIRVALRAMEAPIRQITKNAGDEDSVVANNVKAGEGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKESAGMPDMGGMGG
MGGMGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaatgacgcacgagttaagatgctagaaggtgta
aacgttctggctgacgcagtgaaagtaacactgggtcctaaaggtcgtaacgtagttcta
gataaatctttcggtgctccaaccatcactaaagacggtgtatctgtagcgcgtgaaatt
gagctggaagacaagttccagaacatgggcgcgcaaatggttaaagaagtagcgtctaaa
gcaaacgacgctgcgggtgacggtacaacaacagcaaccgtactagcgcaagcaatcgta
aacgaaggtctaaaagcagttgcagcgggtatgaacccaatggatcttaagcgcggtatc
gacaaagctgttgcagcggcagtagagcaactaaaagagctttctgttgagtgtaacgac
accaaagcaatcgctcaggttggtactatctctgcgaactctgacgcaagcgtaggtaac
atcattgctgaagcaatggaacgcgttggccgcgacggtgttatcactgttgaagaaggt
caggctctacaagacgagctagacgtagtagaaggtatgcagttcgatcgcggttaccta
tctccttacttcatcaacaaccaagaagcgggcagcgttgagctagaaaacccattcatc
cttctagttgataagaagatctcaaacattcgtgagcttctaccaactctagaagcagta
gcaaaagcatctcgtccactgctaatcatcgcagaagacgtagaaggcgaagctctagcg
acattggttgtgaacaacatgcgtggcatcgtgaaagttgctgcggttaaagcgcctggt
tttggtgaccgtcgtaaagcaatgctacaagacatcgctatcctaactggcggtactgtg
atttctgaagaaatcggtctagaactagaaaaagtaacgcttgaagatctaggtcaggct
aagcgcgtaagcatcacgaaagaaaactcaaccatcatcgatggtgcgggtgaagaagcg
atgatccaaggccgcgttgctcaaattcgtcaacaaatcgaagacgcaacttcagactac
gacaaagagaaactgcaagagcgcgttgctaaactggctggcggtgttgcagtaatcaaa
gttggtgcagcgactgaagttgaaatgaaagagaaaaaagaccgcgtagaagacgcgcta
cacgcgactcgcgcagcggttgaagaaggcgtagttgcaggtggtggtgttgcactaatc
cgcgctgcatctaagattgttgacctagaaggcgacaacgaagaacaaaacgttggtatc
cgcgttgcgctacgcgcaatggaagcaccaatccgtcaaatcacgaagaacgcaggtgac
gaagactctgttgttgcgaacaacgtgaaagcgggtgaaggttcttacggctacaacgca
gcgacgggtgaatacggtgacatgctagagatgggtatcctagacccaactaaagtaact
cgtagcgctctacaatttgcagcgtctgtcgctggtctcatgatcacaacagaagcgatg
gtaactgacctaccacaaaaagaaagcgcaggcatgcctgacatgggtggtatgggcggt
atgggtggcatgggcatgatgtaa
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