Vibrio parahaemolyticus RIMD 2210633: VP2893
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Entry
VP2893 CDS
T00120
Name
(GenBank) putative transcriptional activator CadC
KO
K03765
transcriptional activator of cad operon
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpa03000
]
VP2893
Transcription factors [BR:
vpa03000
]
Prokaryotic type
Other transcription factors
Others
VP2893
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GFIT
Motif
Pfam:
Trans_reg_C
TPR_19
DUF4832
Motif
Other DBs
NCBI-ProteinID:
BAC61156
UniProt:
Q87KT3
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Position
1:complement(3078216..3079784)
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AA seq
522 aa
AA seq
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MVGVYFQINDWVLSVDENKLYRQDREVTVEPRLINLLHFLAEHANEVFNREELIQYVWAG
AIVTDQVVTQSIFELRKLLRDGREENTSYVITVPKRGYKLVANVTPMTHEEFVASRQSEE
EENAPLVEEPEEETLPIAPAVTFPAGPLTRAVCEMSKEKKAPQKKNKISPWRLGLMNFIW
ISVLVVVMGVFTYKQSEVRITQAIDTHLIEFKFQDNFTSEGLSYDLADGFAQKLMSDIAQ
VSDYRVMLKKASFTSGIVPGKSVVVRVRENDGGSFLEVEYRNNSSEKVLFSRQYALTSSH
LKTVLQQASLDLMQVLKVPDAKLKSTMLVAGMPMNPDALELFVQANHYLNVSDAKQFRQG
IDLMENILEIEPDNAYVQAELLIAYHVQKVLDSSLELKKGRVQQLSDALETNVKMMVGPI
QPRIYEALALHETIAGDMASAKQHLGQALRLRDSVLSYVIRGKHAELDGDLDLASESYSE
AFYIDTSVETYLLCENLVFPSNMKAIDYAMYRAVHPSVVRML
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggttggagtctattttcaaatcaatgactgggttttaagcgttgatgaaaataagctg
tatcgacaagatagggaagttactgttgagccgcgcttaattaatcttttgcacttctta
gctgagcatgcaaatgaggtgttcaatcgcgaggaattgatccagtacgtttgggctggg
gcgattgtgaccgatcaagtggtgactcagtccatttttgagttgcgtaaattgctgcgt
gacggtcgggaagaaaataccagttacgtcattacagtaccgaaacgtggctacaagctg
gtggcgaacgtgactccgatgacgcatgaagagtttgtcgcaagtcgccaaagtgaagag
gaagagaacgcgcctttggttgaagaaccagaagaagagactctgcctatcgcacctgcc
gttacttttcctgccggccctctgactcgtgcggtctgcgagatgtcgaaagagaaaaag
gcccctcagaaaaaaaataaaatcagcccgtggcgcttgggactgatgaacttcatctgg
atcagtgttttggtcgtggtgatgggcgtgtttacctacaagcaatcggaagtgcgtatt
acccaagccatcgatactcaccttatcgaattcaagtttcaagataacttcacgagcgaa
gggttaagctatgacttggcagacgggtttgcccaaaagttgatgtctgacattgctcaa
gtcagtgattaccgagtcatgctaaagaaggcgtcgtttacttctggcattgtgcctggt
aaatccgttgtggtacgagttcgtgagaatgacggtggcagctttttagaggtggaatat
cgcaataactcatctgaaaaggtgttgtttagtcgtcaatacgcgttaaccagtagccat
ttaaagaccgtgcttcaacaagcatcgttggacttgatgcaagtgctgaaagtgccggat
gccaaattaaaatctacgatgctggtggcgggaatgcccatgaatcccgatgccttggaa
ttgtttgtgcaagctaaccattatcttaatgtctctgatgccaagcagtttcgtcaaggc
atcgatttgatggaaaatattttagaaatcgagccagataatgcttatgttcaagctgaa
ttgctgattgcttaccacgtgcagaaagtgctcgattcgtctctcgaactaaagaaaggg
cgagtgcaacaactcagcgatgcgctggaaaccaacgtgaaaatgatggttgggccaatt
caacctcgaatttatgaagctttggccctacacgaaaccatcgctggtgacatggcgtca
gccaagcagcatcttgggcaagcattgaggttacgtgattcggtgctgtcttatgtgatt
cgcggtaagcacgctgaattggatggtgatctggatttggccagtgagtcttacagcgaa
gctttctatattgatacgtcggttgagacgtacctgctgtgcgaaaacttggtcttccca
agtaatatgaaggcgattgattacgccatgtatcgcgctgttcacccttctgtcgttcga
atgctttaa
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