Vibrio parahaemolyticus RIMD 2210633: VP2939
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Entry
VP2939 CDS
T00120
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpa03016
]
VP2939
Enzymes [BR:
vpa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
VP2939
Transfer RNA biogenesis [BR:
vpa03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
VP2939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_31
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_15
Methyltransf_12
PrmA
DREV
DUF6579
Motif
Other DBs
NCBI-ProteinID:
BAC61202
UniProt:
Q87KN8
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All DBs
Position
1:3143338..3144447
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AA seq
369 aa
AA seq
DB search
MATLDVNPQRYQEQLAEKVERLTDMFAPYNVPELEVFESPEQHYRMRAEFRVWHEGEDLY
YIMFNQETREKYRVDQFPAASRLINDLMPLLVEAMKDNESLRRKLFQVDFLSTLSGEILV
SLLYHRQLDEEWIENAKALKQRLNDEGFNLNIIGRARKMKIILDRDYVIEKLDVNGQSYI
YQQVENSFTQPNGKVAEKMLEWAVDCTQESTGDLLELYCGNGNFSLALAQNFDRVLATEL
AKPSVESAQYNIAANKIDNVQIIRMSAEEFTEAMEGKREFRRLKDNGVDLKSYNCNTIFV
DPPRAGMDVDTCKMVQGYERIMYISCNPETLKENLDILSETHNVTRFALFDQFPYTHHME
AGVLLERKA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttgatgtaaatccacaacgctaccaagaacaactggctgaaaaagtcgaa
cgtctcactgatatgttcgcgccatacaacgtgccagagctggaagtgtttgaatcacca
gagcagcattaccgtatgcgtgctgagttccgtgtttggcatgaaggtgaagacctgtac
tacatcatgttcaaccaagagactcgtgagaaataccgcgtagaccaattcccagcagcc
agccgtctgatcaacgatttgatgccgctattggttgaagcgatgaaagacaacgaatcc
ctacgccgtaaactattccaagtcgatttcctatcgacgctaagcggtgagattctggtt
tcactgctttaccatcgccaacttgatgaagagtggattgaaaacgcgaaagcccttaaa
cagcgtttaaatgatgaaggctttaacctaaacatcattggtcgcgcacgtaagatgaaa
atcatcctagaccgtgactacgtgatcgaaaaactggacgtaaatggccaaagctacatc
taccagcaagtcgaaaacagcttcacccaaccgaatggcaaagtagcagagaagatgttg
gaatgggcggttgactgtactcaagagagcactggcgacctactagagctttactgtggt
aacggcaacttctcgttagcattagcgcaaaacttcgaccgtgtacttgctactgagctt
gctaagccttcggtagaatcagcacaatacaacattgcagcgaacaagatcgacaacgta
caaatcatccgtatgtcggcagaagaatttacagaagcaatggaaggtaagcgcgaattc
cgtcgtttaaaagacaatggtgtcgatctgaagagctacaactgcaacacgatttttgtc
gatccaccacgtgcaggtatggatgtggatacgtgcaaaatggtgcaaggctacgagcgc
atcatgtacatctcttgtaatccagagacactaaaagagaacttggacattctaagcgaa
actcacaatgtgacgcgctttgctctgttcgaccaattcccttacacccaccacatggaa
gccggcgttttactagaacgtaaagcgtaa
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