Vibrio parahaemolyticus RIMD 2210633: VP3002 Help Entry VP3002            CDS       T00120                                  Name (GenBank) ATP-dependent RNA helicase RhlB   KO K03732   ATP-dependent RNA helicase RhlB [EC:5.6.2.7] Organism vpa  Vibrio parahaemolyticus RIMD 2210633 Pathway vpa03018   RNA degradation Brite KEGG Orthology (KO) [BR:vpa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     VP3002  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vpa03019]     VP3002 Enzymes [BR:vpa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      VP3002 Messenger RNA biogenesis [BR:vpa03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      VP3002 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII ERCC3_RAD25_C CMS1 Motif Other DBs NCBI-ProteinID:  BAC61265 UniProt:  Q87KH5 LinkDB All DBs Position 1:3204822..3206135 Genome browser AA seq 437 aa AA seqDB search MKKTHITEQKFADLGLQPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKT LAFLTATFNHLLTTPEHEGRQPTQPRAIIMAPTRELAIQIFNDAEPLIASTGLKAALAYG GESYDKQLAKLQDGVDILIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIR FLFRRMPEPKERLNMLFSATLSYRVQELAFEHMHNPEHVVVEPAQKTGHRIQEELFYPSN EDKMALLQTLIEEEWPDRAIVFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILE QFTKGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFA CEEYAINLPAIEEYIEHTIPVSEYDASALIQDLPAPIRMRAPRVQQRRTNTGGTRSGNRK PQGRRPRQPRQSAPKQS NT seq 1314 nt NT seq  +upstreamnt  +downstreamnt atgaaaaagacgcatatcacagagcaaaagttcgccgatttgggtttacagccccaagtt actgaaggattggaaaaaaaagggttcgaatattgtacccctatccaagccttggcgttg ccggtactgctcaccggccaagacatcgcaggccaggcccaaacgggcactggtaaaacg cttgcgtttttaactgcaaccttcaaccacctacttacgacacctgagcacgaaggccgt caaccaacgcaaccgcgcgcaattattatggcgccaacgcgtgagctagcgattcagatc ttcaacgatgctgagccgctgattgcaagcacaggtctaaaagcagcattagcttacggt ggcgaaagctacgataagcaacttgcgaagctacaagatggcgtagacattctaatcggc acgactggccgtatcatcgatttctacaaacagcgcgttttcaacctaaacaacattcaa gcagttgtattagatgaagccgaccgcatgttcgatcttggctttattaaagacattcgt ttcttgttccgtcgtatgcctgagccaaaagagcgtttgaacatgttgttctctgcgact ttgtcttaccgcgtgcaagagttggctttcgagcatatgcacaatcctgagcatgttgtg gttgagccagcacaaaaaaccggtcaccgtatccaagaagagctgttctacccatctaat gaagacaagatggctctacttcaaactctgattgaagaagagtggccagatcgcgcaatc gtgtttgcgaacaccaaacataaatgtgagtcagtttggggccacttggcggcagatggt caccgcgttggcctattaacaggtgatgttccacagaagaaacgtgaaaagattcttgag caattcactaaaggcgatgtcgacattcttgttgcgactgacgttgcagcccgtggtcta cacattcctcaagtaacgcacgtattcaactatgacctgcctgacgattgtgaagattac gtacaccgcattggtcgtacgggtcgtgcgggcgcgagcggtcattcaatcagctttgcg tgtgaagaatacgcaatcaacttgcctgcgattgaagaatacatcgaacacaccattcct gtgtcggaatacgatgcatcagctctgattcaagatctgcctgcaccaatccgcatgcgt gcgccgcgcgttcagcaacgccgcaccaacaccggtggtactcgctctggtaaccgtaag cctcaaggacgccgtcctcgtcagccacgtcaatcagcgccgaaacaatcataa

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