Vibrio parahaemolyticus RIMD 2210633: VPA0226
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Entry
VPA0226 CDS
T00120
Name
(GenBank) lecithin-dependent hemolysin (LDH)
KO
K11018
thermolabile hemolysin
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vpa02042
]
VPA0226
Bacterial toxins [BR:
vpa02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
VPA0226
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GFIT
Motif
Pfam:
Lipase_GDSL
Lipase_GDSL_2
FrhB_FdhB_C
Motif
Other DBs
NCBI-ProteinID:
BAC61569
UniProt:
Q99289
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Position
2:complement(229683..230939)
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AA seq
418 aa
AA seq
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MMKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVRCWYRTSYSKDDP
ATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFYTNTSQNVIRQRCEATLDLANENADITFF
AADNRFSYNHTIWSNDAAMQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFS
NGFVWTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYAKLAKNYKPANTL
FTLEFGLNDFMNYNRGVPEVKADYAEALIRLTDAGAKNFMLMTLPDATKAPQFKYSTQEE
IDKIRAKVLEMNEFIKAQAMYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDI
NRSSSVDYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESSNNLAEYRF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaacaatcacactattaactgcattactcccgcttgcttctgcagttgcc
gaagagccaaccttatcaccagaaatggtttcagcgtctgaagtgatcagcacgcaagaa
aaccaaacctatacctatgttcgctgttggtatcgcaccagctactcgaaagatgatcca
gcgaccgattgggaatgggcaaaaaacgaagatggtagctacttcaccattgacggctac
tggtggagctccgtttcatttaaaaacatgttctacaccaacacgtcgcaaaacgttatc
cgtcagcgttgtgaagcaacattagatttggcgaacgagaacgcagacattacgttcttc
gccgctgacaatcgcttctcatacaaccacacgatctggagcaacgacgcagcaatgcag
ccagatcaaatcaacaaagtggttgcactcggtgacagcttgtctgatacaggcaacatc
tttaacgcatcacaatggcgcttccctaacccgaacagctggttcttaggtcacttctcc
aacggttttgtttggacagaatacattgccaaagcgaagaaccttccgctctacaactgg
gcagttggcggcgcggctggtgagaaccaatacatcgcgctaacaggggttggtgagcaa
gtttcttcgtacttaacctacgcaaaactggcgaagaactacaaaccagcaaacaccttg
tttacgcttgagtttggtttgaatgacttcatgaactacaaccgtggcgttccagaagtg
aaagcggattatgcagaagcactgattcgtttgacggacgcaggtgcgaagaacttcatg
ttgatgacactgccagatgcgacgaaagcgcctcagtttaagtactcaacacaagaagag
atcgacaaaattcgtgcgaaagtgcttgagatgaacgagttcatcaaggcacaagcgatg
tactacaaagcgcaaggttacaacatcacgttgtttgatactcacgccttgttcgagacg
ctaacttctgcgccagaagagcacggtttcgtgaacgcgagcgatccttgtttggacatc
aaccgctcatcgtctgtcgattacatgtacacccacgcattgcgctctgagtgtgcagcg
tctggtgctgagaagtttgtgttctgggatgtcacgcatccaacaacagcaactcaccgc
tatgttgcagagaaaatgctagaaagtagcaacaacttagccgagtaccgtttctaa
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