KEGG   Vibrio parahaemolyticus RIMD 2210633: VPA0560
Entry
VPA0560           CDS       T00120                                 
Name
(GenBank) putative ABC transporter, ATP-binding protein
  KO
K02003  putative ABC transport system ATP-binding protein
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpa02000]
    VPA0560
Transporters [BR:vpa02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Putative ABC transporter
    VPA0560
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_22 SbcC_Walker_B AAA_18 AAA_29 nSTAND3 AAA_16 RsgA_GTPase AAA_23 nSTAND1 AAA_25 AAA_28 PhoH DO-GTPase2 NB-ARC AAA_24 cobW Dynamin_N MMR_HSR1 NACHT ATPase_2 EF-hand_like ORC-CDC6-like SRPRB DLIC FAD_binding_3 RNA12
Other DBs
NCBI-ProteinID: BAC61903
UniProt: Q87IP6
LinkDB
Position
2:559010..559723
AA seq 237 aa
MTIKLERLTKTYNPDSDFPVHAVQHVDLEIKQGEFVAIMGPSGSGKTTLLNMLGGIDAPT
SGSVEIDGCLISEMSEKELIAYRRDNIGFIFQDYSLLPVLTALENVEFVMQLQGKTEREC
RERAMSLLEQVGLAQQMHKRPSKMSGGQQQRVAVARALAPKPRFVMADEPTANLDAKSTS
ELLDIMEQLSEQEGTTFIFSTHDPRVIKRAHRIIVFEDGRLARDFANIGSTAEKFHA
NT seq 714 nt   +upstreamnt  +downstreamnt
atgacaattaaacttgagcgactgacgaaaacttataatccagacagcgacttccctgtg
catgcggtacaacacgttgatttagaaataaaacaaggagagtttgtcgccatcatgggg
ccttctggctcgggtaaaacaacattgctcaatatgcttggcggcattgatgctccaact
tcaggcagcgttgaaatcgatgggtgtttaatttcagagatgtcggagaaagagctgatc
gcctatagacgagacaatattggttttatcttccaagactacagtcttcttcctgttttg
accgcgttggaaaacgtcgagtttgtgatgcagttacaaggcaaaacggaacgagaatgc
cgagagcgtgccatgtctctccttgagcaagttggtttagctcagcagatgcacaaacgt
ccgagcaaaatgtcgggtggccagcagcaaagagtcgctgtcgcacgggcacttgcacct
aagcctcgctttgtcatggcagatgaaccgaccgccaacttagacgcaaagagtacttcg
gagttactcgacatcatggagcaactgagcgaacaagagggcacgacatttattttctcg
actcacgacccgagggtcatcaaacgagcccatcgtattattgtgtttgaagacggacgc
ctcgcgagagatttcgccaacatcggtagcacggcagagaagtttcatgcatag

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