Vibrio parahaemolyticus RIMD 2210633: VPA0562
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Entry
VPA0562 CDS
T00120
Name
(GenBank) putative chemotaxis transducer
KO
K03406
methyl-accepting chemotaxis protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02020
Two-component system
vpa02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VPA0562
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VPA0562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vpa02035
]
VPA0562
Bacterial motility proteins [BR:
vpa02035
]
Flagellar system
Chemotaxis proteins
MCPs
VPA0562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
CHASE3
ATG14
DUF1664
PsbX
ISG65-75
Vps5
Motif
Other DBs
NCBI-ProteinID:
BAC61905
UniProt:
Q87IP4
LinkDB
All DBs
Position
2:561036..563078
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AA seq
680 aa
AA seq
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MSLYLRLIVVRSLWMNLTISGKLQLSFVLLAVVFIASAIFTYRNINIVEQHASSLLSSDL
PTVDTSRGIQQSVQASLSSIRAYMLLGSDEAESLRLSQEVQSIMASTDDALPTLQALISE
SDFQSIHQQWEAMKVSLSQLIELSHSAENLPAHNLFINEAAPIAEVALDQIQSLINEESG
NEMGGERKRLFKVYADSYTSLANALSALRDFLLYGQQTHLEKYQDLIKFHNQSVAEIDAK
LDMLSDNDQSLWSLFKEMQQMYFPLADQVITLRQSDEWNKANLLMANELLPAANALNQSL
ETIVLAQQAKANQSGIGISQSIKNVLTSMLVAALLVVIAAIAISKYMGNTIGRRVQRLSK
RAKIIASGDVSQPPLNVVGKDELADLTSSINRMNESLAGIVAGVNGKANQVDTSMGALLE
SAQVTSNNVEQQQSNISEMGRQLEEIAFAASNTLDQANQSVQKLSDSKDEIEQGRDALEQ
NKATMESLHSSIESASTQVTQLSKESEAIGRVTEVIEGLAEQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRMLATRTTQSTTEINGIINAIQRSTHTVVQEIEHSQSLAEQGAEHIDNA
VTRLVSTTEQIGSLNEQMAELAAAAEQQSHATQSINGLMAGITQSVEMVASNSQHASETS
LQVKQEVTELNQQMAMFKTA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttatatttaaggctcatcgttgtcaggagtttatggatgaaccttacaatatca
gggaagttgcagctcagtttcgtgctgttagccgtcgtatttatcgcatctgcgattttc
acttaccgtaatatcaacatagttgaacagcatgcatcatcattattgagttccgatttg
ccgactgttgataccagtcgtggaatccagcaatcggttcaagcttcgttgtcttcaatc
cgagcgtacatgttattgggaagtgatgaagccgaaagtttgcgtttgagtcaggaagtg
caaagtatcatggcatcaacggacgatgcattgccaaccttacaagctctgatttcggag
tcagatttccagtcgattcatcagcaatgggaagcgatgaaagtgtcactttctcagctt
attgagttgagccacagcgcggaaaatctgccagcgcataatctgtttattaacgaagct
gcacccattgctgaagtcgcgctcgatcaaattcaaagcctaattaatgaagagtcaggc
aatgaaatgggcggtgagcgtaagcgtttatttaaagtctacgcagacagttacacttct
ctagctaatgcgctctcggcactgcgtgatttcctgttgtacggacagcaaacacatctg
gagaagtatcaagacctgatcaaatttcacaaccaatcggtcgcagaaatcgacgctaaa
ctggatatgttgtcagacaacgaccaatcactatggtcattgtttaaagagatgcaacag
atgtatttccccttggctgatcaagtgattacgctgcgtcaatcagatgaatggaacaaa
gcaaatttgctaatggcaaatgagttgttacctgcggcaaacgcgttaaatcaaagccta
gaaacgattgtgttggctcagcaagctaaagcgaatcaaagcggcattggcatcagtcaa
tcaatcaaaaatgtgcttacgtcgatgctggtggcagcgttactggtcgtgattgcggcg
attgcgatttcaaaatacatgggaaataccattgggcgcagagtccagcgattatcaaaa
cgagcgaagattatagcctctggcgatgtttctcaaccaccattgaacgttgttggcaag
gacgagctggctgaccttacgagctctatcaatcgcatgaatgagtcactggcaggcatt
gttgcaggtgtaaatggcaaagcgaaccaagtggacaccagcatgggtgcgcttctcgaa
tcggcacaagttacatccaataacgttgaacaacaacagtccaatatctcagaaatgggg
cgtcaactcgaagagattgcctttgccgcgagcaatacgttggatcaagctaatcaatcg
gtgcaaaagttgtcagattcaaaagatgagatagaacaaggtcgtgacgcacttgagcaa
aataaagcgaccatggaaagtttacacagcagcatagaaagcgccagcacccaagttacg
cagttaagcaaagagagcgaagcaattggccgcgtgacggaagtgattgaagggttagca
gaacagactaatttgctggcactcaatgcggcaattgaagcggcgagagctggtgaacaa
gggcgaggttttgctgtggttgccgatgaagtgcgcatgttggcgacaagaaccacgcaa
tcgacgacagaaatcaacggtataattaacgcaattcagcgttcaactcacacggtggtt
caggaaattgaacacagccagtcgttggcagagcaaggtgctgagcacatcgataatgcc
gtaacgagattggtttcaacgacagagcagatcggttctctaaacgagcaaatggcagaa
ttggccgctgctgccgagcagcaatctcacgcgacgcaatccataaatgggttaatggca
ggcattacacagtcggtcgaaatggtggcgagtaacagtcagcatgcttctgagacgtcg
ttgcaagtgaagcaagaagtcaccgagttgaatcaacaaatggccatgtttaaaacggct
tag
DBGET
integrated database retrieval system
