Vibrio parahaemolyticus RIMD 2210633: VPA0615
Help
Entry
VPA0615 CDS
T00120
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00280
Valine, leucine and isoleucine degradation
vpa00650
Butanoate metabolism
vpa00907
Pinene, camphor and geraniol degradation
vpa01100
Metabolic pathways
vpa01120
Microbial metabolism in diverse environments
vpa04146
Peroxisome
Module
vpa_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VPA0615
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VPA0615
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VPA0615
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VPA0615
Enzymes [BR:
vpa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
VPA0615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
BAC61958
UniProt:
Q87IJ1
LinkDB
All DBs
Position
2:complement(619330..620232)
Genome browser
AA seq
300 aa
AA seq
DB search
MTLPTNVTIVEVGPRDGLQNESPVSTRTKIRLIDLLSDTGLSHIEAGSFVSPKWVPQMAD
SKEVMQNITRRASVTYSALTPNLQGLEQALDAGANQVAIFTSASEGFCQHNINCSIAKSL
KRFEPLMVQADKYHVPVRGYLSCVVDCPYDGATSPTQVANISQALIELGCYEVSLGDTIG
TGTPNRIKEMLESVLARIPNQRLAVHFHDTWGQALANIYQALSMGINTVDSSVAGLGGCP
YAHGASGNVATEDVLYLCQGLGIETGVDLELLAKAGWMISDELQRQPTSKVSQALRHRME
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacactgcctactaacgtaaccattgttgaagttggccctagagatggacttcaaaat
gaatcaccggtttcgactcgcactaaaatccgtctgattgatttactttctgacacgggt
ttgagtcacatcgaagccggctcatttgtctcacccaaatgggttccgcaaatggcagat
tccaaagaagtcatgcaaaatatcacgcgaagagcctcggtgacttactcggcactcacc
cccaacctccaagggttagagcaagccttagatgctggcgctaatcaggtcgccattttc
acttcggcttctgaaggtttttgccagcataatatcaactgttcaattgcaaagagcttg
aaacgcttcgagccattaatggttcaggccgataaataccatgttcccgttcgtggctat
ctgtcgtgcgtcgtcgattgtccttacgatggggcgacatctccaacacaagtagccaac
atctcgcaagcgttgatcgagttgggatgctatgaggtgtccttgggcgacacgatcggg
accggtacacctaatcgtataaaagaaatgctggaatcggtgctagcgcgcattccaaac
caacgtttagccgtacactttcatgatacatggggacaagcgctggcaaatatctaccag
gccttaagcatgggcatcaacacggtagacagcagtgtcgcaggattgggagggtgtccg
tacgcacatggtgcatctggcaatgttgctacagaagacgtgttgtatttatgccaaggc
ttgggcattgaaactggcgtggatttggagctgttagccaaagcaggatggatgataagc
gatgaactgcaacgccaaccaacatcgaaagtttcacaggcattacgtcatagaatggaa
taa
DBGET
integrated database retrieval system