KEGG   Vibrio parahaemolyticus RIMD 2210633: VPA0672
Entry
VPA0672           CDS       T00120                                 
Name
(GenBank) helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpa03400]
    VPA0672
Enzymes [BR:vpa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VPA0672
DNA repair and recombination proteins [BR:vpa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VPA0672
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 CdvA Death_3 GH97_N ResIII
Other DBs
NCBI-ProteinID: BAC62015
UniProt: Q87ID4
LinkDB
Position
2:690698..692767
AA seq 689 aa
MQLTATSKAQFFIQNEYYHVEIKENSVLLSSIGSEEHIPFTVWNGKVNVKRGLFWSSLQF
FAHEQDGKQQSWLVQGLPWPQCRKFALEAVRQYQDWHNTQCRKLAEYLPKWEEELYQLKH
LPAYLSHSQVMAWVEKLNQELAEIKTSLDEAKMRMPNRMGEIEPWLVDTSHTLGERNHEW
LENERPNWEVLFNRIESSPLNLSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVAYLLQSH
QAQAEELLMLAFGRDAAKEMKERLVDKVGLAAEGVRVNTFHQLGLYILNQVEQQPVEISP
LALDDNQRTAWCVDWLKKHWMTPTNFKRWQKHLDKWPIAYLKGDDELGSHSENPKLIAWL
DSQLSHLAAVGLTKKQVQEKLVDHQDYTRLNSELALCWPCFSAWQKMLKESNQVDFPTMI
SRATDYVNKGKFVSPWRFVMVDEYQDISPDRLALIEALCESTEKQPGATLFAVGDDWQAI
YQFAGADVDLITGFKERFAHSTVHHLDTTYRFNNQIGDVANTFVQQNPSQLPKTLNSHKQ
RKQKSVHTAPSNQVEKILDQLNQQAKQTKSVLLLGRNHYHKPDLYDDWLRRFPNLDIRFM
TCHASKGREADFVIILAVDEGQFPAKKKQIHIDGALTESKDKFPYAEERRLFYVAVTRAK
EKVWITHTGAGSAFVQELVSGDYPIVTSR
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgcagcttactgccaccagcaaagcacagttttttattcaaaatgagtattatcatgtc
gaaataaaagagaacagtgttttattaagctcaattggcagtgaagagcatattcctttc
accgtctggaacggtaaagtcaacgtgaaacgcggcctgttttggagctcgcttcagttc
ttcgctcacgagcaagatggcaagcaacaaagttggttagtacaaggtttaccttggcct
caatgtcgtaagtttgcgttagaagctgtgcgtcaatatcaagattggcacaacactcag
tgccgaaaactggcggagtaccttcctaaatgggaagaagagttgtaccagctcaaacac
cttcctgcctatctttctcattctcaagttatggcgtgggtagagaaactcaatcaagaa
ctcgcagaaatcaagaccagcctagacgaagctaaaatgcgcatgcctaatcgcatgggt
gaaattgagccttggctggttgacacctctcatacgctgggagagcgcaatcacgaatgg
ctggagaacgaacgtcctaattgggaagtcttgttcaaccgcattgaatcgtctccgctg
aacttgtcgcaacaatacgcagtgttgctcaatgatgatcacaacctcgttttggctggg
gcaggctcgggtaaaaccagcgtattgactgcaagagtggcttacttacttcaaagccat
caagctcaagcggaagaacttttgatgcttgcgtttggccgagatgccgcgaaagaaatg
aaagagcgtttggttgataaagtcggtttggcggcagaaggcgtaagagtcaataccttt
catcaactcggcttgtacattcttaatcaagtcgagcagcagcctgtcgaaattagccct
cttgcattagacgataaccaacgcacggcttggtgtgtcgactggttgaaaaagcactgg
atgacaccaacaaatttcaaacgttggcaaaagcatttagataaatggcctattgcttac
ctgaaaggtgatgatgagctgggtagccattcggaaaacccgaagctgattgcttggttg
gattctcaattgtcgcatttagctgctgttggtttaacaaaaaagcaagtgcaagagaag
ttggtggatcaccaagactatacgcgcctcaatagcgaattagcattgtgttggccgtgt
ttttctgcatggcaaaaaatgctcaaagagagcaatcaagtcgatttcccaaccatgata
agtcgagcaacggattacgtgaataaagggaagttcgtatcgccttggcgttttgttatg
gtcgatgagtatcaagatatctctccagatcgtttggcgttgatcgaagcgttatgtgaa
tcaacagagaagcagcctggcgcaaccttgtttgccgtgggcgatgactggcaagcgatt
taccagtttgcgggcgcagatgtggacttgattactgggtttaaagagcgattcgctcac
tctacggtacatcacctagacacgacctatcgtttcaataatcaaattggcgatgtggcg
aatacgttcgtgcaacaaaacccatcacaattaccgaagacgctcaacagccacaaacaa
cgcaagcaaaagagcgtgcacacagcgccaagcaaccaagttgagaaaatcctcgatcaa
ttgaatcaacaagcgaaacaaactaagtctgtattgttgcttggccgtaaccattaccat
aaacccgatttgtatgatgactggttaagacgattcccgaatctcgatattcgttttatg
acttgtcatgcgagtaaaggtcgagaagccgattttgtgattattttggctgtggatgaa
gggcagttcccagcgaagaagaagcagattcacatcgacggtgcgttgaccgagtccaaa
gacaaattcccgtatgccgaagagcgccgactgttctatgtcgcagttacgcgtgcaaaa
gagaaagtgtggatcacgcatacgggcgcgggttctgcatttgtgcaagaactcgtaagt
ggcgactacccaatcgttacctcacgctaa

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