Vibrio parahaemolyticus RIMD 2210633: VPA0803
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Entry
VPA0803 CDS
T00120
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00260
Glycine, serine and threonine metabolism
vpa00460
Cyanoamino acid metabolism
vpa00630
Glyoxylate and dicarboxylate metabolism
vpa00670
One carbon pool by folate
vpa00680
Methane metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01120
Microbial metabolism in diverse environments
vpa01200
Carbon metabolism
vpa01230
Biosynthesis of amino acids
vpa01240
Biosynthesis of cofactors
vpa04981
Folate transport and metabolism
Module
vpa_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VPA0803
09102 Energy metabolism
00680 Methane metabolism
VPA0803
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VPA0803
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VPA0803
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VPA0803
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VPA0803
Enzymes [BR:
vpa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VPA0803
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAC62146
UniProt:
Q87I03
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All DBs
Position
2:complement(831565..832860)
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AA seq
431 aa
AA seq
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MNKSYPNHSLENFFSTNLSATDDAVFAGIQAEFTRQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYDDVRALALEHKPKM
IIAGGSAIPRTIDFAKFREIADEVNAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVNNPEGDAIVEKRVRKEV
KELCSRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagttaccctaaccacagcttggaaaactttttctctaccaacctctctgcg
acagatgacgctgtctttgccggaattcaggcggaattcactcgccaaaacgaacaaata
gaacttatcgcctctgagaacattgtgtctaaagcggtaatgcaagctcaaggcacatgc
ctaacaaacaaatacgctgaaggttatccaggtcgccgttactatggtggttgtgagcac
gtagatacagtggaagccattgctatcgaacgcgcaaaaaaactttttaattgcgaatac
gcaaacgttcaacctcactcaggcgctcaagcaaacggcgcagtgaaactggcactactt
caacctggcgacaccattcttggcatgtctttggacgcaggtggccacctaacacacggt
gcacgccctgctctatctggcaagtggtttaatgcagttcaatacggcgttgatcgtgaa
acactagaaatcaactacgatgatgtgcgcgctctggcgctagaacacaaaccaaagatg
atcatcgcaggcggtagcgcgattccacgtactatcgatttcgcaaagttccgtgaaatc
gccgacgaagtgaacgcaatcctaatggtcgatatggcgcacatcgcaggccttatcgca
acaggcgcacaccctagcccattgccacacgcacacgttgtgaccacgacaacgcacaaa
acactgcgtggtccacgcggaggcatgattctgactaaccacgaagacatcattaagaag
atcaattcggcggtattcccaggcctacaaggcggtccattaatgcacgttatcgccgct
aaagcggtcgcatttggtgaagcacttggccctgaatttaaaacttatattgattcggtg
atcaataacgcaaaagtcctagcggaagtattgcaaactcgcggttgcgacatcgtaacc
ggtggtacagatacgcacttaatgcttgttgaccttcgtcctaaaggcttgaaaggcaac
aaagcagaagaagctctagagcgtgctgggatcacatgtaacaaaaatggcatcccattc
gatacagagaagcctatgattacatcgggcatccgtttaggaacgcctgcgggtacaagc
cgcggctttggcgctgaagaattcaaactcatcggtaattggattggtgacgtactggac
ggtttggtgaacaacccagaaggtgacgcaatcgttgagaaacgcgttcgcaaagaagta
aaagagctttgcagtcgcttccctctttaccagtaa
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