Vibrio parahaemolyticus RIMD 2210633: VPA1084
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Entry
VPA1084 CDS
T00120
Name
(GenBank) ribose ABC transporter, periplasmic D-ribose-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02010
ABC transporters
vpa02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VPA1084
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VPA1084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VPA1084
Transporters [BR:
vpa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VPA1084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
PucR
ANF_receptor
FAD_binding_4
Porin_7
Motif
Other DBs
NCBI-ProteinID:
BAC62427
UniProt:
Q87H81
LinkDB
All DBs
Position
2:complement(1143361..1144239)
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AA seq
292 aa
AA seq
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MKKLATLISAALLSSTVSVAAQAQDTMAIVVSTLNNPFFVTMKDGAEAKAKELGYDLIVL
DSQNDPSKELSNIEDLTIRGVKAILINPTDSDAVSNAIRMANRSNIPVLTLDRGASRGEV
VSHIASDNVVGGEMAGHYIMEKVGEKAKVIQLEGIAGTSAARERGEGFMTAVKGSDMELL
ASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAVQASGKNVMIVGFDGTE
DGIAAVNRGKLAATIAQQPDLIGALGVETADKVLKGEKVDEYIPVPLKVVTK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttgcaactcttatctctgctgcacttctttcttccactgtatcagtagcg
gcgcaagcccaagatacgatggcgattgtggtttcgacgctaaacaacccgttcttcgta
acgatgaaagatggtgcggaagctaaagcgaaagaactgggatacgatttgattgtactg
gactcgcaaaatgacccgagcaaagaactgtcaaacatcgaagacctaaccattcgcggt
gtaaaagcgattttgatcaacccaacggattctgacgcagtgtctaacgcgattcgtatg
gcaaaccgttctaacatccctgtgttaacgctagaccgtggtgcaagccgtggtgaagta
gtgagccacatcgcatctgacaacgttgtaggcggcgagatggctggccactacatcatg
gaaaaagttggcgagaaagcaaaagtgattcagctggaaggtattgctggtacgtctgcg
gctcgtgagcgtggtgaaggcttcatgaccgctgtgaagggaagcgatatggagcttctg
gctagccagccagctgactttgaccgcacgaaaggtctcaacgtaatggaaaacctactg
gctgctaacccggatgttcaagcggtgtttgcgcagaatgatgagatggctctaggtgca
ctacgcgcggttcaagcgtcgggtaaaaacgtcatgatcgttggttttgacggcacagaa
gacggcatcgcagcggttaaccgtggcaagctagcagcaaccatcgcgcagcaacctgat
ctcatcggcgcgttaggcgttgaaacggctgacaaagtactgaaaggcgagaaagtggat
gagtacatcccagttcctctaaaagtggtaacaaaataa
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