Vibrio parahaemolyticus RIMD 2210633: VPA1111
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Entry
VPA1111 CDS
T00120
Name
(GenBank) putative glycine betaine-binding ABC transporter
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VPA1111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VPA1111
Transporters [BR:
vpa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
VPA1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
BAC62454
UniProt:
Q87H54
LinkDB
All DBs
Position
2:complement(1171740..1172678)
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AA seq
312 aa
AA seq
DB search
MSKMTKILSTIALSSLATGAYANQCKTVRFADVGWTDITATTAVTTELLKGLGYKTKTDL
LSVPVTYSSMANGDIDIFLGNWMPTMEGDIAKYRDAGTVETVKANLVGAKYTLAVPKYVY
DAGVRSFADLEKHADKFKDRIYGIEPGNDGNRLIQSMIDSNAFGLKDFSLVESSEAGMVS
QVSRAVRRNQWIVYLGWAPHPMNNNVEMEYLAGGDDFFGPNYGGANVYTNVRKNYLAECP
NAGQLLKNLEFSLEMENELMEAILNQKQKPSKAAQAWLNANADKIEAWLKDVKTVDGQDA
KAAISAYLKTNA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagatgacgaaaatactatcgactatcgcgttaagttctttagctaccggcgct
tacgcaaatcaatgtaaaaccgtgcgatttgccgatgtcggctggacagacattaccgca
accacggctgtaaccacagagctactgaaaggcttgggttacaaaaccaagacggatctg
ctgtctgtaccagtaacttattcttctatggcgaatggcgacattgatatcttccttggt
aactggatgccaacgatggaaggtgacattgctaagtaccgagatgctggcactgtcgaa
acagtaaaagcgaaccttgtcggcgcgaaatacactctggcagtaccaaaatacgtttat
gacgcaggtgtgaggagctttgctgacctggaaaaacatgccgacaaatttaaagaccgc
atttacggcatcgaaccaggtaacgatggtaaccgcttaatccaatccatgatcgacagc
aacgcatttggtttaaaagacttcagtctggttgaatcaagtgaagcgggcatggtgtct
caagtatcacgtgcggtacgtcgtaatcagtggattgtttaccttggctgggcaccacat
ccaatgaataacaatgttgaaatggaataccttgcgggtggtgatgatttcttcggccca
aattacggcggtgcgaacgtttatacgaacgtacgtaaaaactaccttgctgagtgccca
aatgcaggccaactgctgaaaaacctagagttcagcctagaaatggaaaacgagctgatg
gaagcgattctcaaccagaagcaaaaaccatctaaagccgcacaagcttggttaaacgcg
aacgcagacaaaatcgaagcgtggctgaaagacgtgaaaaccgtcgatggccaggatgca
aaggctgcgatctcagcgtatttgaaaacaaacgcttaa
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