Vibrio parahaemolyticus RIMD 2210633: VPA1129
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Entry
VPA1129 CDS
T00120
Name
(GenBank) putative hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00280
Valine, leucine and isoleucine degradation
vpa00650
Butanoate metabolism
vpa00907
Pinene, camphor and geraniol degradation
vpa01100
Metabolic pathways
vpa01120
Microbial metabolism in diverse environments
vpa04146
Peroxisome
Module
vpa_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VPA1129
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VPA1129
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VPA1129
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VPA1129
Enzymes [BR:
vpa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
VPA1129
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
BAC62472
UniProt:
Q87H36
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All DBs
Position
2:1193730..1194659
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AA seq
309 aa
AA seq
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MSVKIRSTNMLPAKVNIVEVGARDGLQNETAVTLVDKIRLINLLSNCGLKHIEAGSFVSP
KWVPQMADSDQVFAGITQKPDVVYSALTPNLAGLERALESGVKQIAVFGSASEAFSQKNI
NCSIAESLSRFEPVIELAKQHNIPVRGYLSCTMVCPYEGEMKPEQTTSVANTLFDMGCYE
ISLGDTVGKATPNRVIAMLDSLLTQLPKDALAVHFHDTYGQALANIYQALLMGINTIDSA
VAGLGGCPYAKGASGNVATEDVLYLCEQLGIETGVDLNIINEAGWQICHALGKRPSSKVA
LALGDPHSL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaagataaggagcacgaatatgctaccagcgaaggttaatatcgtcgaagtc
ggcgcgcgtgatggcttgcagaatgaaacggcagtgacgctggtcgataaaatccggttg
attaatctgctaagcaactgtggcttaaagcacattgaagcaggctctttcgtctcgccg
aaatgggtacctcaaatggccgattccgatcaggtgtttgcggggatcacacaaaagcct
gacgtggtttacagcgcgctcacaccaaatctcgcagggttagaacgtgcgctggaaagc
ggtgtaaagcaaattgcggtatttggctccgcttcagaagcgttcagccagaagaacatc
aactgcagcattgccgaaagcctctctcgctttgaacccgttatcgagctcgcaaagcag
cacaacatacctgtgcgcgggtatttgtcttgcaccatggtttgcccttatgagggagaa
atgaagccagagcaaaccacttcggtagcgaatacgctgtttgatatgggatgttatgag
atttcgctcggtgacactgtcggtaaggcaacgcccaatcgcgtcattgccatgctggat
tcgctgttaacgcaactgccgaaagacgcgttagcagtgcacttccacgacacatacggg
caagcactagccaatatttaccaagccttgttaatgggcatcaacaccattgacagcgct
gtagctggtttgggcggctgcccttatgcaaagggggccagtggcaatgttgcaacggaa
gatgtgctttatctgtgtgaacagcttggtattgaaacgggagttgatctcaacatcatc
aatgaagcgggttggcaaatttgccatgcattaggtaaacgtccgtcttccaaagtagca
ctcgctttgggtgatccgcacagcttgtaa
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