Vibrio parahaemolyticus RIMD 2210633: VPA1466
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Entry
VPA1466 CDS
T00120
Name
(GenBank) putative TonB system receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VPA1466
Transporters [BR:
vpa02000
]
Other transporters
Pores ion channels [TC:
1
]
VPA1466
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF3825
Motif
Other DBs
NCBI-ProteinID:
BAC62809
UniProt:
Q87G51
LinkDB
All DBs
Position
2:complement(1563041..1565179)
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AA seq
712 aa
AA seq
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MKLTPVSAAVLSVLAASQVHAKSDVFSMEEVVVTANRIEQPVSEVAGSVAVVTSEEIEQK
GETELYDALRHEPGVSVSGGAGRPQNITIRGMTGNRIMIIRDGIRSADGFGANDNNDKVG
RDTFDLSNLESLEVVKGASSSILGSGAIGGAVILKSKQPGEFLEDRDFYVDATGFYTGIS
NKYKGASNLAFRSGDTESLVNAAYWQGEETRNFSQDLYNRDLDGYSASYAINHFFNDEVM
IKARAELYRQDQQRLEGSSSIQKDGKWHIEDFAEDESTEEYSAYLGAELTPLDPAWFEEL
DTKVYWRHTEVVTDTNRLMNSTDANGLLIKRRELEHKTFTDSTVGLRADFKQTLHASSAE
HKLAYGVEIASDYYQREDNQKVLDWTGSNASQKQPFAAARAYNIGLYFRDMIELEKWTLT
GGLRFDAHRLSPDGQNDIGGYPLKDIDSSEISPSLSISREVFENNRVYLSYDHGYRAPEY
DKAYGFVSHDFVPLTPFVIAPNMDLEAETSDSFEIGNKFDNGRAQLYVSAFYNKFQNFID
VVTTGQDNFGNYVKQYQNLHGVETYGAELSAAYAFTSSWKLSTKLGYVDGKDAEGEYVRS
ITPFEGNVGLNYQQQDFNAFATWNWAGSMDRVPSCQTSLGQKTECAKTEAWNTLDLGASY
QITKDFRLSATIINLFDKEYIRYQDVAGIADESKRYSTEPGRYFTVNAKYIF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaccccagtgtcagcggcagtactttcggtactagctgccagccaagtgcac
gccaaatctgacgttttctctatggaagaggttgtggtgacggcgaatcggattgaacaa
cctgtgtctgaagtagcaggcagtgttgcggttgtcaccagcgaagagattgaacaaaag
ggcgaaacagagctttatgatgcgctgcgtcacgagcctggggtaagtgtgtcaggtggc
gctggtcgtccacaaaacatcacgattcggggcatgacgggtaaccgtattatgatcatt
cgtgacggcattcgctctgcagacggttttggggcgaatgacaacaatgacaaagtgggc
cgcgacacgttcgatctatctaatcttgaatcattagaagtagtgaaaggggcaagctcc
tcaatcttgggctctggtgccattggtggtgctgtgatcctaaaatccaaacagccgggc
gagtttttagaagatcgtgacttttatgttgacgccacgggcttttatacggggatcagc
aataaatacaaaggcgcgagcaatttggcatttcgttctggtgatacggaaagcttggtc
aacgcggcttattggcaaggtgaagagacgcgtaacttcagccaagatttgtacaaccgc
gatttggatggttacagcgcgtcatacgccatcaatcatttcttcaatgatgaagtgatg
atcaaagcgcgtgccgaactctatcgacaagaccaacaacgtcttgaaggttcgtcatcc
atacaaaaagatggcaagtggcatatcgaagactttgcagaagatgaatcgacagaagaa
tacagtgcatatttaggtgcagagctaacgccgcttgatccagcatggtttgaagagttg
gataccaaagtttattggcgtcataccgaagtggtcacagacaccaatcgcttaatgaac
tctaccgacgccaatggtctgttgattaagcgccgcgaacttgagcacaaaacatttacc
gatagcacggtcggtttgagagcggatttcaaacagacgcttcacgcctcatcggctgag
cacaagttagcgtatggcgttgagatagcatcggattactaccaacgtgaagataatcag
aaagtcctcgattggacgggttccaacgcatcgcaaaagcaaccctttgcggctgcacgt
gcatacaacattgggctttatttccgtgacatgattgagctggaaaaatggacattgact
ggcggtttgcgtttcgatgcgcaccgactttcacctgatggccagaatgatatcggtgga
tatccattgaaagatatcgacagttctgaaatttcaccaagtttgtcgatttctcgtgaa
gtgttcgaaaacaaccgcgtttacctctcttacgatcacggctatcgagcgccagaatac
gataaggcgtatggcttcgtgagccacgactttgtgccgctgacgccttttgttattgca
ccaaatatggatctagaggctgaaacttcggactcgtttgaaatcggtaacaaattcgat
aatggccgagcgcaactttacgtttctgcgttttacaacaagttccaaaacttcattgat
gttgttaccacgggtcaagataacttcggtaactacgtcaagcaataccaaaacttacac
ggcgttgaaacctacggcgcggagctttctgccgcgtatgctttcacatcgtcttggaag
ctaagtaccaagcttggttatgtggacggaaaggacgctgagggcgaatacgttcgtagc
atcacgccttttgagggcaatgttgggctgaactaccagcaacaagactttaatgcgttc
gcgacgtggaattgggctggttcgatggatcgtgtgccgagttgccaaacgtcgctcgga
caaaagactgaatgcgcaaaaacagaagcatggaacacgctcgatttgggagcaagttac
caaatcaccaaagatttccgtttgagtgcgaccatcatcaacctgttcgacaaagaatac
attcgttaccaagacgttgctggcatagcagatgagagcaaacgttactcaacggaacct
ggtcgttactttacggttaacgcgaagtacatcttttag
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