Vibrio parahaemolyticus RIMD 2210633: VPA1471
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Entry
VPA1471 CDS
T00120
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpa03400
]
VPA1471
Enzymes [BR:
vpa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VPA1471
DNA repair and recombination proteins [BR:
vpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VPA1471
Prokaryotic type
VPA1471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAC62814
UniProt:
Q87G46
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All DBs
Position
2:complement(1570616..1572031)
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AA seq
471 aa
AA seq
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MILVWFRRDLRTLDHTALKAALDTGQPVVACFIATPEQWQEHHMAPMQADLIARRLEHVH
QELTELNIPLLYKEVPRFDDCTQVICDWADKLNATAAMVNINYEVNEVELDRKVSQALDN
RGVEFHAFHDKCVHAPTTVLNKQGEYFKVFTPFKRAWLQKFSLPTVSKPQRQNELPSAQL
AAVKQDGFDADFTFSYPRESSEAWCVSTNDILKQLRTFARERSDGYQMKRDFPAIDGTSQ
LSPYLAIGALSPRQCIARLYAENPQPDLSEGKATWLSEIIWREFYQHLLVFEPKLVKGRG
FIDWEDKIQWSYDEQAFECWKTGTTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLH
IDWRWGEEYFMSKLVDGDFAANNGGWQWSASTGCDGQPYFRIFNPISQGEKFDSDGQFVR
HWVPEIKSVPNKFVHKPWTWEGFSLLEYHKPMVDHKVEREITLRLFKSAKE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgattctggtttggtttaggcgtgatttacgcacgttagaccacacggcgttaaaggcg
gcacttgatacaggacaacctgttgttgcttgttttattgcaacgccagaacagtggcaa
gagcaccacatggcgcctatgcaggcagatttaatcgctaggcgtcttgagcatgttcat
caagagctcacagagctaaacattcctcttctgtataaagaagttccgcgttttgacgac
tgtacacaagtcatttgcgattgggcggataagctcaacgcaacagcggcaatggtcaac
atcaattatgaagtgaatgaagttgagttggatagaaaggtatctcaagcactggataat
cgtggggtagagtttcacgcctttcacgacaaatgcgttcatgcgccaacgaccgtactc
aacaagcaaggtgagtatttcaaagtatttacgccattcaaacgagcatggttgcaaaag
ttttccttgccaacggtatccaagcctcagagacaaaatgaactgcctagtgcgcagtta
gcagcggtaaaacaagacggttttgatgccgattttacgttctcttatccaagggaatcg
agcgaagcttggtgtgtatcgaccaacgacattctcaagcaattgaggacgtttgcacgc
gagcgtagtgacggctaccagatgaagcgagatttccccgctatcgatggtacgagtcag
ctttcgccttatcttgccattggagcattgtcgccaagacagtgcatcgcgaggttgtat
gctgagaatccacaaccggatttgtcagaaggcaaagcaacgtggctaagcgagatcatt
tggcgtgagttctaccagcacttattggtgtttgaacctaaacttgtcaaaggtcgcgga
ttcatcgactgggaagataaaattcaatggtcttacgatgaacaagcttttgaatgttgg
aaaacggggacgactggatatccaattgttgatgcggcaatgcgtcagctcaatcaaact
ggctggatgcacaaccgacttcgtatgattgtcgcaagctttcttaccaaggatttacat
atcgactggcgctggggcgaagaatactttatgagcaagctcgtcgacggcgactttgcg
gcaaataatggtgggtggcagtggtcggcatcgactggctgtgatggccaaccatacttc
cgtatcttcaatccaataagccaaggcgagaagttcgattccgacggtcagttcgtgcgt
cattgggtgccagaaattaagagtgtgccgaataagttcgtccataaaccatggacttgg
gagggattttctttactggaatatcacaagccgatggttgatcacaaggttgaaagagag
ataaccttacggctcttcaaaagtgccaaggaatag
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