Vibrio parahaemolyticus RIMD 2210633: VPA1536
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Entry
VPA1536 CDS
T00120
Name
(GenBank) putative flagellar M-ring protein
KO
K02409
flagellar M-ring protein FliF
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VPA1536
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpa02044
]
VPA1536
02035 Bacterial motility proteins [BR:
vpa02035
]
VPA1536
Secretion system [BR:
vpa02044
]
Type III secretion system
Flagellar export apparatus
VPA1536
Bacterial motility proteins [BR:
vpa02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
VPA1536
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
Motif
Other DBs
NCBI-ProteinID:
BAC62879
UniProt:
Q87FY4
LinkDB
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Position
2:complement(1637775..1639529)
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AA seq
584 aa
AA seq
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MSELTPQVAGNTAMTTSTTQAFSPAGNMDDVTNKLKQLWSSSQRNLVLSAVLAAIVAAII
VVALWSSSQSFRPLYSQQERFDIGEIVSVLESEGVSYRMQEQNGQVLVPEGEVARIRMLL
ASKGVKAKLPTGLDSLKEDSSLGTSQFMETARYRHGLEGELVRTIMSLNSVANARVHLAI
PRQTLFVRQNGENPSASVMLELKPGEDLKPEQVEAIINLIVGSVTAMKPEFVSVIDQYGR
LLSADVASAEAGKVNAKYLEYQKNVEKQIIQRAADMLTPIVGPSNFRVQVAADMDFSQVE
ETREILDNAPVVRNEHTIQNNSIDQIALGVPGSLSNQPPVTGEAATNDSQNTNARSEVNR
QYAVGSSVRRTQYQQGQIEKLSVSVLLNSKASPDGVAWSDADKAQISTMITDAVGISAAR
GDSLSLMSFNFTPIDIDAPTALPWWQDPTVQQPLRYVIGGMLGLAMIFFVLRPLIMHLTG
ADKPVPELNFAEPPQEEPDYDNLQTREEREHEEVLNRRLSEKGISASTGLDVNSDMLPPA
GSPLEIQLKHLQLIANEEPERVAEILKQWVNINEHSSVDVKTNA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaactaaccccccaagttgccggaaatacggccatgacgaccagcacgacacaa
gcgttctcgccagcaggcaacatggacgacgtgacaaataagcttaagcagctttggtca
agtagccaacgaaatcttgttctatccgctgttctcgcggcgattgtagcggcgatcatt
gtggttgcgctttggagttcctctcaaagcttccgtccgctttacagccaacaagagcga
ttcgatattggcgagattgtctcggtcttagagagtgaaggtgtgagctatcgcatgcag
gagcagaacggccaagtgctggttcctgaaggtgaggtggctcgcattcgtatgttattg
gcgtcaaaaggcgtaaaagcgaaactgccaaccggattggattcgctgaaagaagacagc
tcattaggtaccagccagtttatggagactgcgcgttaccgtcatggtttagaaggtgag
ttagtacgcactatcatgtcgctaaactcggtagcgaatgcgcgtgttcaccttgcgatt
cctcgtcaaactttgtttgttcgccaaaacggtgaaaacccgtctgcatctgtcatgctc
gaacttaaaccgggtgaagaccttaagccagaacaggttgaagcgatcatcaacttgatc
gtaggcagtgtgacggcaatgaagcctgagtttgtttctgtcatcgatcaatatggccga
ctgttgagtgcagatgtggcgtcagcagaagcgggcaaagtaaacgcgaaatatctggaa
taccaaaagaacgttgagaagcaaatcatccaacgtgcggcagacatgctaacgccgatt
gttggccctagtaatttccgcgttcaggttgcagccgatatggatttcagccaagtggaa
gaaacgcgagaaatccttgataacgcgccagtggttcgtaatgaacacaccattcaaaac
aattcgattgaccaaatcgcgcttggcgtaccaggttctctcagcaaccagcctccagtg
actggtgaggcggcgacaaacgacagccaaaacaccaatgcgcgctctgaagtgaatcgt
cagtatgcggttggcagcagcgtgcgccgtactcagtaccaacaaggtcagattgagaaa
ttgagcgtatcggttctattgaactcaaaagcatcgccagacggcgtggcttggagcgat
gcagacaaagcgcaaatctctaccatgatcaccgatgccgttggcatttcagccgcgcga
ggtgacagcttgagcttgatgagcttcaacttcacaccgattgatatcgatgcgccaaca
gctctgccttggtggcaagaccctacggttcaacagccattacgttacgtgatcggcggg
atgttgggcttggcgatgatcttctttgtgttgcgtccattgatcatgcacctaactggc
gcagacaagccagttcctgaactgaattttgctgagccgccacaagaagagcctgattac
gacaacttgcaaacacgtgaagagcgtgagcatgaagaagtgcttaaccgtcgtctgtct
gaaaaaggcatttctgcctcgacgggtctggatgtgaacagcgacatgctgcctcctgca
ggttctccactagagattcaattgaaacacctacagcttattgctaatgaagagccagag
cgcgtagccgaaatactgaaacaatgggtaaacatcaatgaacacagctcagttgacgtc
aaaacaaacgcttag
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