Vibrio parahaemolyticus RIMD 2210633: VPA1616
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Entry
VPA1616 CDS
T00120
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00500
Starch and sucrose metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VPA1616
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
VPA1616
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
GH113
Motif
Other DBs
NCBI-ProteinID:
BAC62959
UniProt:
Q87FR2
LinkDB
All DBs
Position
2:complement(1714130..1716190)
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AA seq
686 aa
AA seq
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MKLNLITTTLLLASASAIAEPNITISTTTNSRDFPLSAEQPLVVPLTKDGYTLKITGVEG
DCVAPDGQKVKFNKPIALNCGKPTELPLKVRFTGDYSFAYDDAAKTLLFKREPKKAAKTE
FKRPIPQVQCEVYQGGEVTIAVGDSFPEGTKLRDAYSGQMVEVKEQKVSLTPSKDSGGLV
LLEPVQKTKEAVLFDYRNANIYFVMVDRFNNADASNDNSYGRKKDGKDEVGTFHGGDLKG
VIEKLDYIKSLGTDAIWLSPIVEQVHGFVGGGDSGSFPFYAYHGYWTRDFTKIDENFGNE
EDLKTLVEEAHKRGLKVLMDAVINHSGYSTLADLQFDGIDVLKPNAELPKKWGDWQPKAG
ENWHSYHQNIDYQSLNWAKWWGGDWVRTGLPGYPAPGSSDITMSLAGLPDFITELDKAVK
PAQWLLDNPGTRVEARDNYTVSDYLIEWQTDWVKRFGIDGYRVDTVKHVEGEVWKRLKEE
ASNSLEQWRKENGKSGQPFWMMGEVWGHTAYRSPYFDDGFDALINFDMQKKLDKGAACFS
QMADTYQSYADTIANEKDFNPVSYMSSHDTELFFSRFKDYGMQRNAANALLLSPGAVQVY
YGDEVGRNIGPYADDFHQGTRSDMVWKLSDDKQALLKHWQTLGQFRQAHPAIGAGQHRVI
EQEGAYVFSRSLGNDKVVVAFVGRDK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaacctgattaccacgactttactgcttgcgtcggcaagtgccatcgccgag
cctaacatcaccatttctaccacgactaacagccgtgacttcccgctaagtgcagagcag
cctttggttgtgcctctaaccaaagacggatacacgcttaaaatcacgggcgttgaaggc
gactgcgttgcacccgatggtcagaaagtgaagttcaataaacctatcgcgctaaattgt
ggcaagccgaccgaactgccactcaaagttcgctttactggcgactattccttcgcttat
gacgacgcggctaagacgttgctgtttaagcgagagccgaaaaaagcagcaaaaaccgaa
tttaaacgcccgatcccgcaagtacaatgtgaagtctaccaaggcggtgaagtgacgatc
gctgtgggggatagctttcctgaaggcaccaagttacgcgatgcttattcaggtcaaatg
gttgaagtgaaagagcagaaagtatcgctgacgccaagtaaagactctggtggcctagtg
ctgctagagcctgtgcagaaaaccaaagaggcggtgctatttgattaccgaaacgcgaac
atttacttcgtgatggttgatcgtttcaacaacgcagacgcaagtaacgacaacagttat
ggtcgcaaaaaagacggcaaagatgaagttggcacgttccacggcggtgaccttaaaggc
gtaattgagaaattggattacatcaagagcctaggtacagacgcgatttggttgtcgcca
atcgttgaacaagtgcacggctttgtcggtggtggcgatagtggctcattcccgttttat
gcttaccacggctactggacgcgcgatttcaccaagattgatgagaacttcggtaacgaa
gaagatttaaaaacgctggtggaagaggcgcacaagcgtggcctcaaagtcttgatggat
gcggttatcaaccattctggttactcaacattggcagatctacagttcgacggtatcgat
gtgttaaagcctaatgccgaactgcccaagaaatggggcgactggcaaccaaaagcaggc
gaaaattggcatagctaccaccagaatattgattatcagagtctgaactgggcgaagtgg
tggggcggcgattgggtaagaaccggtttgccgggttacccagctcctggcagtagcgac
attacgatgtctcttgctggcttgccagatttcatcactgaattagacaaagcagtgaag
cccgcgcagtggctattggataaccctggtactcgcgttgaggcgcgtgacaattatacc
gtctcggactacctaattgagtggcaaactgattgggtgaaacgctttggcattgatggt
taccgtgtcgatacggtgaagcacgtcgaaggtgaagtttggaagcgtctaaaagaggaa
gcatcgaacagcctagaacaatggcgtaaagaaaatggcaaatcaggtcagccgttctgg
atgatgggcgaagtctggggacacaccgcgtatcgcagcccttatttcgatgatggtttt
gacgcgttgatcaacttcgatatgcagaagaagctagacaaaggtgcggcgtgctttagc
caaatggcagacacttaccaaagctatgcggacactatcgcgaacgagaaagacttcaac
ccagtcagttacatgtcttctcacgatacggagttgttcttctcacgttttaaagattac
ggcatgcaacgtaacgccgcgaacgcattgctccttagcccaggagcggttcaggtttat
tatggcgatgaagtaggccgtaacattggcccttacgcggatgatttccaccaaggcaca
cgttcagacatggtttggaagctatctgatgacaaacaagctttgctgaaacactggcaa
acccttggtcagttccgtcaagcgcaccctgccattggcgcaggtcagcatcgagttatt
gaacaggaaggcgcgtacgttttctctcgttcgcttggcaatgacaaagtcgtcgtggcg
tttgttggacgtgataagtaa
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