Vibrio parahaemolyticus RIMD 2210633: VPA1635
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Entry
VPA1635 CDS
T00120
Name
(GenBank) ornithine decarboxylase, inducible
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00330
Arginine and proline metabolism
vpa00480
Glutathione metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VPA1635
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VPA1635
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
VPA1635
Enzymes [BR:
vpa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
VPA1635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
BAC62978
UniProt:
Q87FP3
LinkDB
All DBs
Position
2:complement(1738012..1740192)
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AA seq
726 aa
AA seq
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MKRLIIGVSNYMPEDFSLLAESLDEQFNRHLQPLEQVELTDVGAAIITSADIKAGLHKMI
SETGYGIPVFLVTDENPVSAEDYVWLTGVIDLERQSIEYYCRQINEAVTKYECRLLPPFF
KQLTHYVEMGNSAFDCPGHQGGQFFKKHPAGKQFYDFFGENLFRSDLCNADVDLGDLLIH
EGSAHQAQAHAAKVFNADKTYFVLNGTSASNKVVCNALVTEGDLVLFDRNNHKSNHHGAL
IQAGGMPVYLETARNPWGFIGGMDEHCFDEEYIRAQIAKVDPERARDERPFRLAIIQLGT
YDGTIYNARYVMDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDAGVIVTQS
VHKQQAGFSQTSQIHKKDRHIKGQARYCNHKRFNNAFMMHASTSPFYALFSALDVNAKIH
DGEAGLRLWRDAVKTGIEARKEILKSCELIRPFIPDEVEGQPWGSYDTDVIATNKKFFMF
EPNASWHKFEGYGEGQYFVDPCKLLLTTAGIAEDGSYADFGIPATLLANFLRENGIIPEK
CDLNSILFLLTPAEDMGKIRHLVAQINRFEKFIRDDAPLSIVLPSVYEANKERYRGYTIR
QLCQEMHDMYKELNVKQLQKAMFRSEYFPQMVHKPDVATRKYFRGECDYLPLKEAVGRVA
AEGALPYPPGIICVITGEIWTPHVVDYFLSLEEGINRFPGFAPEIQGVYLEDVNGRTTAH
CYVLKD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttaattataggtgttagtaattacatgccagaagacttcagtttattagct
gaatctttagatgaacaatttaatcgtcatttacaacctttagagcaagttgaattaacc
gacgttggtgcggctattattacttcagcagacattaaagcaggtctgcataaaatgatt
tctgaaacgggttacggtattccagttttcttagtaacggatgaaaacccagtttcggca
gaagattacgtttggctaactggcgttatcgatttagaaagacaatctattgagtactac
tgtcgtcaaatcaacgaagcagtaaccaagtacgaatgtcgtctgcttcctcctttcttc
aagcaattaacgcactatgttgagatgggtaactcagcgtttgactgtccgggacaccaa
ggtggtcagttcttcaaaaaacacccagctggtaaacaattctacgatttctttggcgaa
aacctgttccgtagtgacttgtgtaacgcggacgtggatttaggtgacttgctgatccac
gaaggttctgcacaccaagcgcaagcgcacgctgcaaaagtatttaacgcggacaaaact
tacttcgtactcaacggtacttctgcttcaaacaaagtggtgtgtaacgcgctagtaact
gaaggtgatttggtactgttcgaccgtaacaaccacaaatcgaaccaccacggtgcgtta
atccaagcgggtggtatgccagtttacttagaaacggcgcgtaacccttggggcttcatc
ggtggtatggatgagcactgtttcgatgaagaatacattcgtgctcaaatcgcgaaagtg
gatccagaacgtgcacgcgatgaacgtcctttccgtcttgctattatccagcttggtact
tacgacggtactatctataacgctcgctacgtgatggataagatcggtcatctttgtgac
tacatcctgtttgactctgcgtgggttggttatgagcagttcatccctatgatgaaagac
tgttcaccactgctgctggatttgaaaccagaagacgcaggtgtgatcgtgactcagtct
gttcacaaacaacaagctggtttctctcaaacatcgcaaatccacaaaaaagaccgccat
atcaaaggtcaagctcgttactgtaaccacaaacgctttaacaacgcgtttatgatgcac
gcatcgacttcaccattctacgcactgttctctgcgcttgatgtgaacgcgaagatccac
gacggcgaagccggtctgcgtttatggcgcgatgcggttaagactggtatcgaagcgcgt
aaagaaatccttaagagttgtgaattgattcgtccgttcattccagacgaagtcgaaggt
caaccttggggcagctacgacactgacgtgatcgcaacgaacaagaaattcttcatgttt
gagccaaacgcaagctggcacaaatttgaaggttacggtgaaggtcaatacttcgttgac
ccatgtaaattgttgctaactactgcgggtattgcagaagacggcagctacgcagatttc
ggtattcctgcaacgctattggcgaacttccttcgtgaaaacggcatcatccctgagaag
tgtgacttgaactctatcttgttcctactcactcctgcggaagatatgggtaagatccgt
caccttgtggctcaaattaaccgattcgaaaaattcatccgtgatgatgcgcctctaagt
atcgtacttccaagcgtctacgaagcgaataaagaacgctaccgtggctacaccatccgt
cagctatgtcaggaaatgcatgacatgtacaaagagctgaacgtgaaacagctacaaaaa
gcgatgttccgcagcgagtacttcccacaaatggttcacaaaccagacgtggcaacacgc
aaatacttccgtggtgaatgcgattacctaccacttaaagaggccgttggtcgcgtagcc
gctgagggtgcacttccttaccctccaggcatcatctgtgtgatcactggtgaaatctgg
accccacacgtggtggattacttcctatctctagaagaaggcatcaaccgcttcccaggc
ttcgcgccagaaattcaaggcgtgtaccttgaagatgttaacggtcgcactaccgcacat
tgttatgtcctaaaagattaa
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