Vibrio parahaemolyticus RIMD 2210633: VPA1739
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Entry
VPA1739 CDS
T00120
Name
(GenBank) oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa01501
beta-Lactam resistance
vpa02010
ABC transporters
vpa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VPA1739
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPA1739
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VPA1739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VPA1739
Transporters [BR:
vpa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VPA1739
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
BAC63082
UniProt:
Q87FE0
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All DBs
Position
2:complement(1860970..1862595)
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AA seq
541 aa
AA seq
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MDLKKHSTALLISSLFTPFLSASVVADTLPNGVQLAAEQHLVRANDAEAATLDPAKAEGL
PEMHVIRDLFEGLVIQDRDGNIIPGVAESWETKDNLTFVFHLRKDAKWSNGEPVTADDFV
YSLRRAVDPKTASPNVWYLKLTKIKNIADVAEGKKPLDDLGIVAVDKYTLRFELDSQVPY
FVAMTGHTSMMPVHQATVENRDKPWSDPDQFVSNGAFTLDKWVVNERIELVKNPNYWDSA
DTHLNKVTYIPFENQNASINRYAVGEVDITSDVPTHMAQKLKQDYKRAYTVVPLLCTYYY
AFNTTRPPFDDARVRQAVSYSIMRDVITNGVTQVGNLPAYTFAHQYTAGFDATPPEYSNW
SQQQRDEKARELLKEAGYGDGKPLDFKLLYNTSEANKSIAVAIASMLHKNLGTNVELENQ
EWKSYLVARKQGNFDVMRASWCGDYNEASTFLSLLRSGSSGNFARYSSQAYDNVMNSALS
ATDEKARQGFYDQAEQLLAADMPIAPIYYYMQARLVRPTVGGFAKNNVEGRIYSKDLYIK
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaaaacattcaacggcgttgctgatttcctctttattcaccccttttctt
tctgcatctgtcgttgcggataccttacctaacggcgttcaactcgccgcagagcaacat
ttggtacgtgcgaatgatgcagaggcggcaacgcttgatccggcaaaagccgaaggtctg
ccagaaatgcacgtgattcgtgacttatttgaagggctggtgattcaagatcgtgacgga
aacatcattcccggtgtggcggagtcgtgggaaaccaaggacaacctaacctttgttttt
cacctacgcaaagatgcgaaatggtcgaatggcgagcctgtgacggcggatgattttgtc
tattcactgcgccgagcggtagatccgaaaaccgcttctccaaatgtttggtatctcaaa
ctcaccaagatcaaaaacatcgccgatgtggcagagggcaaaaagcctttggacgatctc
ggtatcgtggcggtggataaatacaccttacgttttgagttggacagtcaagttccgtac
tttgttgccatgaccgggcacacgtccatgatgccagtgcatcaagcgacagtggaaaac
cgcgacaagccgtggagcgatcccgaccaatttgttagcaacggtgcattcacgttggat
aagtgggtcgtgaatgagcgcattgaactggtcaagaacccaaattactgggacagcgca
gatacgcatttaaacaaagtgacttacattccgtttgaaaaccaaaacgcgtcgatcaat
cgctatgcggtaggtgaggtggatatcacgtcagatgtgccgactcatatggcgcagaag
cttaaacaagattacaagcgggcttacacggtggtgccattgctgtgcacgtattactac
gcgttcaataccactcgtccaccatttgatgatgcgcgagtgcgtcaagcggtatcgtac
tccatcatgcgcgatgtgatcacgaatggtgtcacgcaagtgggcaaccttcctgcttat
acttttgcgcatcagtacaccgcagggtttgatgcaacgcctccagaatacagtaactgg
agtcaacaacaacgtgatgagaaagcacgtgaactgctgaaagaagcgggatacggtgat
ggcaaacctttggatttcaaattgctgtacaacaccagtgaggcaaataaatcgatcgcc
gttgcaatagcctcgatgctacacaagaatctcggtacaaacgttgagttagaaaaccaa
gaatggaagtcgtacttagtggcgcgtaaacaaggcaatttcgatgtgatgcgtgcgtct
tggtgtggtgattacaacgaagcgtccactttcttgagtttattgcgttcaggttcttcg
ggtaactttgcacgttacagtagccaagcgtacgacaacgtgatgaacagtgcattgtct
gcaaccgatgagaaagcgcgccaaggattttatgaccaagcagaacagttgctggcggca
gatatgcccattgcgccaatctattactacatgcaagcgcgtttggttcgccctacggtt
ggcggttttgccaaaaacaacgtagagggtcgtatctactcgaaagacctttacattaaa
aagtaa
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