Vibrio parahaemolyticus BB22OP: VPBB_0002
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Entry
VPBB_0002 CDS
T02409
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpb03016
]
VPBB_0002
Transfer RNA biogenesis [BR:
vpb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VPBB_0002
Prokaryotic type
Methyltransferases
VPBB_0002
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
ABC_tran
Ras
Gtr1_RagA
SRPRB
Roc
Arf
MCM
AAA_18
AAA_28
AlphaC_N2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AGB08529
LinkDB
All DBs
Position
1:complement(910..2271)
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AA seq
453 aa
AA seq
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MTTDTIVAQATAPGRGGVGIIRVSGPKANQVALEVTGKTLKPRYAEYLPFQAEDGTVLDQ
GIALYFPNPHSFTGEDVLELQGHGGPVVMDMLIKRILGIAGVRAARPGEFSERAFLNDKM
DLTQAEAIADLIDASSEEAAKSALQSLQGQFSQHIQTLVESLIHLRIYVEAAIDFPEEEI
DFLADGKVAGDLQAIIDNLDAVRKEANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKES
AIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVEKIGIERAWDEIAQADRVLF
MVDGTTTDATDPKEIWPDFVDRLPESIGMTVIRNKADQTGEDMGICHVNDPTLIRLSAKT
GAGVDALRNHLKECMGFSGNTEGGFMARRRHLDALERAAQHLQIGQEQLEGYMAGEILAE
ELRITQQHLNEITGEFSSDDLLGRIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgactacagatacgattgtcgctcaagctactgcacccggtcgtggtggtgtcggcatt
attcgtgtttcaggccctaaggccaaccaagtggcattggaagtcacagggaaaactcta
aaaccgcgttacgctgaatacctgccgtttcaagccgaagatggcacggtgctcgaccaa
ggcattgcactgtacttccctaacccgcactcgttcacgggcgaagacgtattagaactg
caaggtcacggtggccctgtggtcatggatatgctgattaaacgtattctgggcatagct
ggcgtacgagcagcccgtcctggtgagttctcggaacgtgcgttcttgaacgacaagatg
gacttgactcaggcagaagcgattgccgacctgattgatgctagctctgaagaagcagcg
aaatcggcgctacaatcgctacaaggccagttctcgcagcatattcaaacgctggtggaa
tcactgattcatcttcgcatctatgtggaagcggccatcgacttccctgaagaagaaatc
gattttcttgccgatggtaaagttgcaggagatctgcaagctatcatcgataacctcgat
gcggtacgcaaagaagcgaaccaaggcgcgatcatgcgcgaaggcatgaaagtcgtgatt
gctggtcgtcccaatgcaggtaaatcaagcctactgaacgcgctgtcgggcaaagagtcc
gcaatcgtaacagacatcgcaggtaccacgcgtgacgtgctgcgtgagcacatccatatc
gacggtatgcctttgcacatcatcgatactgctggcttgcgtgacgcttctgatgaagtc
gaaaaaatcggtatcgaacgcgcttgggatgaaatcgcgcaagccgaccgcgtattgttt
atggtggatggcacgacgaccgacgccaccgatccaaaagaaatttggcccgattttgtc
gatcgcctgccagaaagcattggcatgacggtgatccgcaacaaagcggatcaaacaggt
gaagatatggggatctgtcatgtgaacgatcctactctgattcgcctttcagcaaaaacc
ggggcgggtgtcgatgcgctgcgtaaccacctaaaagagtgcatgggtttctcaggtaat
actgagggtggctttatggcgcgccgtcgtcacttggacgcactagaacgtgcagctcaa
catctgcaaatcggccaagagcagcttgaaggctatatggcaggtgaaatccttgccgaa
gagctacgcattactcagcagcatctgaatgagataaccggggagttcagctctgacgac
ctactcgggcgtatcttctcttcattctgtatcggtaaataa
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