Vibrio parahaemolyticus BB22OP: VPBB_0003
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Entry
VPBB_0003 CDS
T02409
Name
(GenBank) Inner membrane protein translocase component YidC, long form
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb02024
Quorum sensing
vpb03060
Protein export
vpb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VPBB_0003
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VPBB_0003
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPBB_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vpb03029
]
VPBB_0003
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpb02044
]
VPBB_0003
Mitochondrial biogenesis [BR:
vpb03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
VPBB_0003
Secretion system [BR:
vpb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VPBB_0003
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Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
DUF2427
Motif
Other DBs
NCBI-ProteinID:
AGB08530
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Position
1:complement(2388..4010)
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AA seq
540 aa
AA seq
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MDSQRNILLIALALVSFLLFQQWQVAKNPAPQAVEQAQSSSTLPAPSFADELDPVPGQQQ
ASAKTITVTTDVLTLSIDTVGGDVVHADLNQYSAELDSSDPFVLLKDTQGHQFIAQSGLV
GPQGIDLSSSNRPHYNVSADSFTLADGQDELRVPMTFTANGIEYTKTYVLKRGSYALNVE
YDVANNSGNNATFGMYAHLRQNLMDAGGSITMPTYRGGAYSTEDTRYKKYSFEDMQDRNL
SINLADGQGWAAMIQHYFAAAWIPRNEPGTNLYTRVIGNLGDIGVRMPNKTIATGDQAKF
EATLWVGPKLQQEMAAVAPNLDLVVDYGWLWFIAKPLHSLLAFIQSFVGNWGVAIICLTF
IVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGC
LPLVLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYILPLLMGASMFLIQKMSP
TTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKALEKKGLHTK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaacgtaatatcctgctcatcgctctggcactggtttctttcttgctattt
caacaatggcaagtcgcaaagaatccagcacctcaagcggttgaacaggctcaatcaagc
agcactctacctgcaccatcttttgctgatgagctggacccagttcctggtcaacagcaa
gcttctgcaaaaactatcacagtaacgactgatgttttaactctgtcgatcgacaccgtt
ggtggcgatgtggtacatgccgacctaaaccaatactctgctgaacttgattcatcagac
ccattcgttctgctaaaagatacacaaggtcatcaattcatcgcacaaagcggtcttgtt
ggtcctcaaggtatcgatctaagcagctctaaccgtcctcactacaatgtgagcgcagac
agcttcactctagctgacggtcaagacgaactacgcgttccgatgacatttactgcaaac
ggcatcgaatacacaaaaacttacgtattaaaacgcggcagctacgcgctgaacgttgaa
tacgatgtagcgaacaactctggtaacaacgcaaccttcggtatgtacgcacacctacgt
caaaacctaatggacgcaggtggtagcatcacaatgccaacctaccgtggcggtgcttac
tcaactgaagatactcgttacaaaaaatacagctttgaagatatgcaggatcgtaacctg
tctatcaacctagcagatggccaaggttgggcagcaatgatccaacactacttcgcagct
gcttggatccctcgtaacgaaccaggaactaacctttacactcgcgtaattggcaaccta
ggcgatatcggcgtacgtatgccgaacaaaacgatcgcgacgggtgaccaagcgaagttt
gaagcaacactttgggttggtcctaagctacaacaagaaatggcagcagtggcaccaaac
ctagacctagttgtggactacggctggctatggttcatcgctaaaccacttcactcactg
cttgctttcatccaaagcttcgtgggtaactggggtgtggcaatcatctgtttgaccttc
atcgttcgtggtgcaatgtacccactaacgaaagcgcaatacacgtctatggcgaaaatg
cgcatgctacagcctaagctgcaagctatgcgtgagcgtattggcgacgaccgtcaacgc
atgagccaagagatgatggaactgtacaagaaagagaaagtaaacccactgggtggctgt
cttcctcttgttctacagatgcctatcttcatcgcactatactgggcgctaatggaatcg
gttgagcttcgtcactctccattcttcggttggattcatgacctttcagcgcaggaccct
tactacatcctgccactactgatgggtgcttcaatgttcctaatccagaagatgagccca
acaaccgtaacggatccaatgcagcagaagatcatgaccttcatgccggttatgtttacc
ttcttcttcttgttcttcccatcaggcctagttctgtactggttggtgtcgaacatcgtt
actctgatccagcaaaccttgatttacaaagcgctggagaaaaaaggcttacacactaag
taa
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