Vibrio parahaemolyticus BB22OP: VPBB_0053
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Entry
VPBB_0053 CDS
T02409
Name
(GenBank) Gluconate utilization system Gnt-I transcriptional repressor
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpb03000
]
VPBB_0053
Transcription factors [BR:
vpb03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VPBB_0053
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GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_10
HTH_3
HTH_24
HTH_7
HTH_Tnp_ISL3
Sigma70_r4
HTH_23
TetR_N
Hpr_kinase_N
DUF218
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AGB08580
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Position
1:66710..67717
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AA seq
335 aa
AA seq
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MAQQNKKTRTTLQDVADQVGVTKMTVSRYMRNPESVAEKTRVKIAAAIEEMGYIENRAPA
MLSKSSSKAIGILLPSLSNQIFASFVQGIETVTKANGYETLLAHFSYDELEEERKIASLL
SYQVDGLILTESHHTPRTLQMIKNAGVPVVETMELPPQPIDMAVGLDHEDASYNAVKRML
DAGKRTIVYFGARLDTRTKLRMQGYDRAMNEAGLEPKHVLTGVHSSFSLAHDLLERALET
YPTLDGVFCTNDDIAIGAMLSAQQRGIQVPQQLAVVGYNALDIGQTISPKLTSVDTPRFQ
IGVKSAELLIARLKGEAQEEKVFDMGYQITSGESV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagaataaaaaaacacgaacgacattgcaggatgtcgcagaccaagttggc
gtaacaaagatgacggtttcgcgctatatgcgcaatccagaatcggtggctgagaagacc
cgcgtgaaaattgccgcggcaatcgaggagatggggtacatcgaaaatcgcgcccccgcg
atgttgtctaagtcttccagcaaagccatcggcatcttacttccttctctgtccaaccaa
atttttgcttcctttgttcagggcatagagacggtcactaaggctaacggctacgaaaca
ctactggcacactttagctacgatgagttggaggaagagcgcaaaatcgcctctttgctt
tcctatcaagtggatgggttgattttgactgaaagccaccacactccacgtacgttgcag
atgatcaaaaacgctggcgttccggtggtcgaaaccatggagttgccgccacaaccgatt
gatatggctgtgggcttggatcatgaagacgcttcgtacaacgcggtgaaacgtatgttg
gacgctggtaaacgcaccattgtttatttcggtgcgcgtttggacacgcgtaccaaactg
cgtatgcaaggttacgatcgcgcgatgaatgaagccggactcgaacccaaacatgtgtta
actggcgtgcactccagtttctcccttgcgcatgatttgcttgaacgcgccctggaaacg
tacccaacgctcgacggggtgttctgtaccaacgatgacatcgcaattggtgctatgctg
agcgcgcagcagcgtggcattcaagtcccgcagcaattagcggtggtgggttataacgcg
ttggatatcggtcagaccatcagtccgaagctgaccagcgttgatacaccacgtttccaa
attggtgtaaagagtgcagagcttttaattgcgcgtctgaaaggcgaagcgcaagaagaa
aaagtgtttgatatgggttatcagatcacttcaggagagagtgtttaa
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