Vibrio parahaemolyticus BB22OP: VPBB_0319
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Entry
VPBB_0319 CDS
T02409
Name
(GenBank) Uncharacterized protein YtfN
KO
K09800
translocation and assembly module TamB
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpb02000
]
VPBB_0319
Transporters [BR:
vpb02000
]
Other transporters
Pores ion channels [TC:
1
]
VPBB_0319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AGB08839
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All DBs
Position
1:322166..325933
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AA seq
1255 aa
AA seq
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MIKKMFKWTKWLSLSLIGLLLLITIFVATVLFTHPGLKLAIWGAEKALPQLKVESIQGSL
FPRFALQNVSFVDESLHIDAKVERIALAINFRCFFDPKVCVDELALQGVNFQMPELPPAS
EEPEEETPPLRSISTPVPIFVNKVSFNDINVNVLGNQIDWQTFSTALSMQGDRLVIAPTA
LKDINVALAPSEAEPEAAAEEPKETDATPQDIVLPEVWIPLTVEARRLDIHNFKLAGETP
VIVNHLGLVARAGGERVDVKTLELDMPEVEGKLSTQVTLSADYPIKAQLDALVKQADAKG
QKLSLSASGSVGDLSLNATLSELVQAEIKGDIQPLKTQLPFDVSIKNVQAQWPLFGQSDY
QVSVPSLAAKGSLDGYEVALETKASGKDIPAVDVALNGKGTLEQIDLESLVVKTLGGELS
GKVMANWAAPINWQADLNLKNIQPGLQWKEAEGDISGSLSTSGSLTEQGGWQVSLPKLDI
DGILRGYPLNVEGQLEASDKNGKGEDIQLTTQGLALSHGPNQLSAKGKIDKQILMDVEVN
FPDFAKSVPDLAGKMQGKVALRGSLKEPDINLDLALNQINWQQQANVETITLKGDVTPLP
APKANLSLIANNITYDDIKVDSADLEVSGDEKLHQLTLDVVSDLVSTSLEIEGTFKQKPE
MIWDGALRRLTLSSQQGPWSLQKSTAVKVNIDKQIANVQAHCWLQAKSSVCLTEDISVGK
SGQAKLAINDFNFDQIKQFLPPETKLQGSVNAQAFAKWAPEKKPEVTLSVNMPKGQVEQA
LEQPIKVGWDSFSFKAALAKDKLDAEWLFDVKDNGDLSGKVSLLNVSSEKPTIDGKVALS
TFHLDFLAPLIGEYSLFKANMNTDLALSGDVMHPKVNGQFLIDQMKLQGEVTPIDINSGQ
VVINFKGHQADLDAGIITPDGKLEITGDADWRDLQDWRTRARVFAKELKVDMPPMVKIKV
EPDMTIDVTPQLAKVEGNINLPWGRIVIEELPPSAVGVSSDTVILNKDLQPVDEVTAMPF
NVETDINIKIGDDFQLAAFGLKGGLKGSLNVTQKDKGPFIVGEVNIVDGSYRSFGQDLVI
EEGKILMNGPADQPYVSIKAIRNPDNTQDDVIAGVRVTGPASDPSVEIFSEPAMPQANAL
SYLLRGQDIDGESGGNAMTTTLIGLSLAKSGRVVGEIGEAFGVQDLQLDTAGSGDDSQVT
VSGYILPGLQVKYGVGIFNSLGEFTVRYRLMQDLYLEAVSGVDSAVDLLYQFEFD
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaagatgtttaagtggaccaagtggttatcactaagtttgattggtctgctg
ttgttaatcactatttttgtcgcaacggtactgtttacccatccagggttgaagctggcg
atttggggtgcagagaaagccttacctcaactcaaagtcgagagcattcaaggttcgcta
ttccctcgttttgcactgcaaaatgtcagttttgttgatgagtctttacatattgatgcg
aaagttgagcgcattgcgttggcgattaacttccgctgtttctttgacccaaaagtgtgt
gttgatgaactggcgctgcaaggtgttaacttccaaatgccagaattgccaccagccagt
gaagagcctgaagaagaaacaccaccgctgcgttctatcagcacgccagtgccaattttt
gtcaataaagtcagctttaatgacatcaacgtcaatgtgttaggcaatcagattgattgg
caaacgttctcgaccgctttgtcgatgcaaggcgatcgtttggtgatcgcaccaaccgcg
ttgaaagacatcaatgttgcgctcgcacctagtgaagctgaacctgaagcggctgccgag
gagccgaaagaaactgacgctacgccgcaagatattgtgttaccagaagtatggattccg
ctgacggtagaagcgcgccgtctggatattcacaattttaaactggcaggtgaaacgcca
gtgatcgtcaatcatcttggtttggttgcaagagcgggtggtgagcgtgttgatgtcaaa
acgttagagctcgacatgccagaagtggaaggcaagttaagcacacaagtgaccctttct
gctgattacccaatcaaagcgcaattggacgcgttagtgaagcaagcggatgcgaaggga
caaaaactgtcgctttcggcttctggctcggttggggatttatcgttaaatgctacgctt
tctgagcttgtacaagcggagatcaaaggtgacatccaaccgcttaaaacgcagttaccg
tttgatgtttcgatcaaaaatgttcaagcgcaatggccgctatttgggcaaagtgattat
caggtttctgtaccaagtttggcggcaaaaggttcacttgatggttacgaagtcgcatta
gaaaccaaagcgtcaggcaaagacattcccgccgttgatgttgcgctgaacggcaaaggt
acgctggagcaaatcgatctcgaaagccttgtagtgaaaactttggggggcgaactttct
gggaaagttatggcgaattgggcggcgccaatcaactggcaagccgacctgaacctaaag
aacattcaaccaggattgcagtggaaagaagcagaaggggatatcagcggtagcctctcg
acgtcgggatcgttaacggaacaaggtggttggcaagtcagtttgcctaagttagacatc
gatggcattttgcgaggttatccattgaatgtcgaagggcaacttgaagcgtctgataag
aatggcaaaggtgaagacatccaactaaccactcaaggtttagcgctttctcatggcccg
aaccaactgagtgcgaagggcaagatcgacaaacaaatcttgatggatgttgaggttaac
ttccctgactttgcgaaaagtgttccggatcttgcgggtaagatgcaaggtaaagtagcg
ctacgtggtagtttgaaagagcctgacatcaatcttgatctcgctttaaatcagatcaac
tggcagcaacaggcgaatgtagaaacgatcaccttaaagggcgatgtgacgcctctgcca
gcaccaaaagcgaacttaagtcttattgcgaataacattacctacgacgacattaaagtt
gatagcgcggatcttgaagtctctggagatgaaaaactgcatcaactgacgcttgatgtg
gtgtcagatctggtttcgaccagtttggaaatcgaagggacgtttaagcagaagccagaa
atgatttgggatggggcgctgcgccgcttgacgctgagctcgcaacaaggtccttggtca
ctgcaaaaatcgactgcagtgaaggtcaatatcgacaaacagatcgcgaatgttcaagct
cattgttggttgcaagcgaagtcgagtgtgtgtctaaccgaagatattagtgtcggtaag
agtggccaagcgaagttagcgatcaatgattttaattttgaccaaatcaaacaattcctg
ccgccagaaaccaagctgcaaggttcagttaatgcacaggcttttgctaaatgggctcca
gagaaaaagcctgaagttaccttgagtgtcaacatgccaaaaggccaagttgaacaagca
ctagagcagccaattaaagtgggctgggacagcttcagctttaaagcggcattagcgaaa
gacaagcttgatgctgagtggttatttgatgtgaaagataacggtgacttgtctggtaag
gtttctttactgaatgtctcatctgagaagccaactattgacggtaaggttgcgctttct
acgttccacttggacttcttggctccgttgatcggggaatacagcttgttcaaggcgaat
atgaatactgatttggccttgtctggtgatgtaatgcatccaaaagtgaatggtcagttc
cttatcgatcaaatgaaactgcaaggcgaagtgacgccaatcgacatcaactccggacaa
gtcgtgattaactttaaaggtcaccaagcggatctggatgctgggatcattacgcctgac
ggtaagctagaaatcaccggtgatgctgactggcgtgacttgcaagactggcgcactcgt
gcccgcgtgtttgcaaaagagctgaaagttgatatgccgccgatggtcaaaatcaaagtt
gagccggacatgaccattgatgtcacaccgcagttggcgaaggtggaaggtaacatcaat
ctgccatggggacgtatcgtcattgaggaactgccaccaagtgcggttggggtgtcgagt
gataccgtgattttaaacaaggatttacagccagttgatgaagtgacggctatgccattc
aacgtcgaaacggacatcaacatcaagattggtgacgacttccaacttgcggcgtttggc
ttgaagggcggcttgaaaggtagccttaacgtgacacaaaaagacaaaggaccattcatc
gttggtgaggtaaacatcgttgacggttcttaccgttcatttggtcaagatttggtgatc
gaagaaggtaagatcttaatgaacggcccagcggatcaaccgtatgtatcgatcaaagcg
attcgtaaccctgacaatactcaagacgatgtgatcgcgggtgtgcgtgtgactggccct
gcttccgatccgagtgtggaaattttctcggagcctgcgatgccacaagccaacgcgttg
tcttacctgcttcgtggtcaagatattgatggtgagtcgggtggtaacgcgatgacgact
acattgattggtctgagtttggcgaaaagcggtcgtgttgttggagaaatcggtgaagcc
tttggcgtacaagatttacagcttgatacggcaggctcgggtgatgactctcaagtgacg
gtgagtggttacattttgccaggtctacaggttaagtatggtgtcggcatcttcaactcg
ctgggtgagttcacggtgcgttaccgattgatgcaagacctgtatttagaggcggtatct
ggtgtagatagcgcagttgacctactctatcaatttgaatttgattag
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