Vibrio parahaemolyticus BB22OP: VPBB_0358
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Entry
VPBB_0358 CDS
T02409
Name
(GenBank) CalR, calcium-responsive transcription factor, LysR family
KO
K05798
LysR family transcriptional regulator, transcriptional activator for leuABCD operon
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpb03000
]
VPBB_0358
Transcription factors [BR:
vpb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VPBB_0358
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
OGT_N
Motif
Other DBs
NCBI-ProteinID:
AGB08878
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Position
1:364057..365016
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AA seq
319 aa
AA seq
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MLEKKDAMSAIASYRMESTLRGVDLNLLTVFDAVMQEQNITRAAHNLGMSQPAVSNAVAR
LKVMFNDELFMRQGRGIQPTQRARQLFGPIRQALQLIRNELPSSVFQPESSTRLFKLAIC
SPCDMRFAPKIMAKINQQAPNVQLHLDAEFDRLLSERMRYQEIDFVIDYARFDEQGFSST
EIFKDELVVIASKTHPRIQGGVSAEQLINEKHAKLSKVHGQRSFSEQAYRELDCQAAYEG
SSLSNLLYVVSQSELVTIAPRWMAENAVNSDQLQILDFPFANKEISGFLSWHESSEKDKG
HIWLRDQLMVTCGEVVASK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaagaaagatgcgatgagcgcaattgctagctaccgtatggaaagcactttg
cgtggtgtagatttgaacctactgactgtatttgatgctgtgatgcaagagcaaaatatc
actcgtgcagcacacaacttaggcatgtctcaaccggcagtaagtaatgccgtggcacgc
ttaaaagtgatgtttaacgatgaactgttcatgcgtcagggccgtggtattcaaccaact
caacgtgcgcgtcaactgtttggccctatccgccaagcattgcagctgatccgtaacgaa
ttgccaagctcggtattccaaccagagtcgtcaactcgtctattcaagctggcgatttgc
agcccatgtgacatgcgctttgctccaaaaatcatggcgaagattaatcaacaagcgcca
aacgttcagctacatctagacgcggaatttgaccgtcttctttctgagcgcatgcgttac
caagaaatcgacttcgtgatcgattacgctcgttttgatgagcaaggtttctcaagcaca
gaaatcttcaaagatgaattggtggttatcgcttcgaaaacgcacccacgtattcaaggt
ggcgtaagcgccgagcagctaattaacgaaaagcacgcgaaactgtctaaagttcacggt
caacgtagcttctctgagcaggcgtaccgcgagcttgactgccaagctgcgtacgaaggt
tcaagcctaagcaacttgctttacgttgttagccaatctgagttagtgactatcgcacca
cgctggatggcggaaaatgcggtgaacagtgaccaactgcagattctagacttcccattt
gcgaacaaagaaatcagcggcttccttagctggcatgaatcaagtgaaaaagacaaaggc
cacatttggctacgtgaccagctaatggtgacgtgtggtgaagtggttgcatcaaaataa
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