Vibrio parahaemolyticus BB22OP: VPBB_0436
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Entry
VPBB_0436 CDS
T02409
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00300
Lysine biosynthesis
vpb00550
Peptidoglycan biosynthesis
vpb01100
Metabolic pathways
vpb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VPBB_0436
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VPBB_0436
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VPBB_0436
Enzymes [BR:
vpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
VPBB_0436
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AGB08954
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Position
1:453519..454883
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AA seq
454 aa
AA seq
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MIKVTLSQIAEITGGALFGNDLTIDAVSTDTRTIDNGALFVALVGERFDAHNFCQQAFEA
GAGALLVEKRLDVNAPQVVVSDTKIALGELASWVHHSCQTPTVAITGSCGKTTVKEMVAS
ILQQKGNVLFTAGNFNNDIGVPLTLLRSQQDDDYAVIELGANHIGEIAYTTQLVKPDIAL
VNNVAAAHLEGFGSIEGVKQAKGEIYQGLQAGGIAIVNLDSNGDALWQSVLADKIVITFS
HNNSQADFYASNVTMNEEGKASFTLHISSDSREIELSLGIIGQHNVANAIAASIIALHMG
ATVEEIQFGLLNLNKVKGRVDVEQLSSTIKLIDDSYNASVPAMKAAVDLLGAFRGQRWLI
LGNMAELGEESLALHRQVGEHAAPQKFEHVLTYGADAKIISELCHGIHFETHQEMIDYIK
QHLDQTVSDQHTILVKGANGARMFEVAAALKEYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggttactttatctcaaattgcagaaatcactggcggagcgttattcggtaac
gatctgactatcgacgcagtgtccactgacacgcgaacgatcgacaatggtgcgctgttt
gttgcgcttgtcggtgaacgattcgatgctcataatttttgtcagcaagcatttgaagcg
ggggctggtgccttattggttgaaaagcgtcttgatgtgaatgcgccgcaagtcgtggta
tcggataccaaaatcgcactgggcgagttagcttcttgggtgcaccattcttgccaaacg
cctaccgttgcaataactggcagctgtggaaagaccacggtgaaagagatggttgccagc
attcttcagcaaaaaggcaacgtgttgttcacggcaggtaacttcaataatgatattggt
gttccgctgaccttgctgcgttctcagcaagatgacgattacgcggtgattgagctaggc
gcaaaccatattggtgaaattgcttacactacgcagcttgtgaaaccggatatcgcgctg
gtaaacaatgttgcggcggcgcatttggaaggctttggttctattgagggtgtaaagcaa
gccaaaggtgaaatctatcaagggttacaggctggtggcattgccatcgtcaatctcgat
agtaacggtgacgcgctgtggcaatcggttcttgcagataaaatagtgatcactttctcg
cataataattcgcaagcggacttttacgcatcgaacgtgacaatgaatgaggaaggtaaa
gcgagctttactttgcatatttcatcagattcgcgagaaattgaactgtcacttggtatt
attggtcaacataacgttgcaaatgctattgcggcctcaatcattgcgctacacatgggg
gcaaccgttgaagagattcagtttggtcttttaaaccttaacaaagtaaaaggccgagtg
gatgtggagcaactcagctcgacgatcaagttgatcgatgacagctacaatgcaagcgta
cctgcgatgaaagcggcggttgatttgcttggggcgtttcgcggtcagcgctggttgatt
ttaggcaatatggcggaattgggtgaggaaagtcttgcacttcaccgtcaagtcggggaa
catgctgccccacaaaaatttgaacatgttctcacatatggtgcagacgcaaagatcatt
agcgagctttgccatggcattcactttgagacacatcaagagatgattgactacatcaag
cagcatctagaccaaaccgtttctgaccaacacactattttggttaaaggcgcgaacggt
gcacgtatgtttgaagtcgctgctgctttgaaggagtatttttaa
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