Vibrio parahaemolyticus BB22OP: VPBB_0438
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Entry
VPBB_0438 CDS
T02409
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00470
D-Amino acid metabolism
vpb00550
Peptidoglycan biosynthesis
vpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VPBB_0438
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VPBB_0438
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpb01011
]
VPBB_0438
Enzymes [BR:
vpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VPBB_0438
Peptidoglycan biosynthesis and degradation proteins [BR:
vpb01011
]
Precursor biosynthesis
Amino acid ligase
VPBB_0438
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Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
NAD_binding_7
DAO
NAD_binding_8
TrkA_N
Lycopene_cycl
Thi4
Motif
Other DBs
NCBI-ProteinID:
AGB08956
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Position
1:456005..457318
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AA seq
437 aa
AA seq
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MERWQNIHNVVVVGLGITGLSVVKHLRKTQPQLTVKVIDTRDNPPGAERLPEQVELHRGG
WNTQWLAEADLVVTNPGIALATPEIQTVLAKGTPVVGDIELFAWAVNKPVVAITGSNGKS
TVTDLTGVMAKAAGLTVGVGGNIGVPALELLEQDADLYVLELSSFQLETTSSLKLKAAAF
LNLSEDHMDRYEGMADYRAAKLRIFDHAELAVVNRDDQETYPEVEMPVVTFGSDEQAYGL
EVDGSRTWLLDHGQRVIASDELKLVGKHNLANALVVLALLKAAGVDYHNALNALKNYTGL
THRCQVVADNRGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGKGADFTPLKPIF
ATLNLQLCCFGLDGDDFMPLHESAIRFNTMEDVIQQISSQLKSGDMVMLSPACASFDQFD
NFMARGDAFAVLAQKYA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttggcaaaacatacataacgttgtcgtcgtagggctcggtattaccgggctc
tctgtcgttaaacacctccgaaaaactcagccgcaattgacggttaaagttattgatacg
cgtgacaatccgccaggcgccgagcgtctgcctgaacaggttgaactacaccgtggtggt
tggaatacccagtggcttgcagaagctgacttggtggtgaccaaccctggtatagcgttg
gcgacaccagagatacaaacggtgctagcgaaaggcacgcctgtcgtgggggacatcgag
ttgtttgcttgggctgtgaataaaccagtggtggccatcacgggttcaaacggcaagagc
acggtgacagatttaactggtgtgatggcaaaagcggcaggattgacggtgggtgtcggc
ggtaacattggcgtgcctgcactggagctgcttgagcaagatgcggatttgtatgtactg
gaactttcaagttttcagttggaaacgacgtcgagtttgaaactcaaagcggcggcattt
cttaacctttccgaagatcatatggatcgctacgaaggtatggcagattatcgcgctgct
aagttgcgtatttttgatcatgcagagttagccgtggttaaccgtgatgaccaagagacg
tacccagaggttgagatgcctgtggttacgtttggcagcgatgagcaagcttacggcctt
gaagtcgatggttctcgcacatggttacttgatcatggtcagcgcgttatcgccagcgat
gaactgaaacttgtcggcaaacataacttagcgaacgctctcgtcgtgttggctctgctc
aaagcagccggtgttgattaccacaacgctttgaatgcacttaaaaattacactggactg
acacaccgatgccaggtggttgcggataatcgtggcgtaaaatgggtgaatgactctaaa
gcaactaatatcgcaagcactatggcggcgctatcaggattagagtcgaccggtaaactt
tatctgctcgttggtggtgtcggtaaaggcgcggacttcacgccattaaaaccgatcttt
gcaacgcttaacctacaactgtgctgttttggtctagacggtgatgattttatgccacta
catgaatcagcaatccgtttcaacaccatggaagatgtgattcaacaaatatcttcgcag
ttaaaatctggtgatatggtgatgctgtctcccgcatgtgctagctttgatcaattcgac
aattttatggcaagaggcgatgcatttgctgttcttgctcagaaatatgcataa
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