Vibrio parahaemolyticus BB22OP: VPBB_0451
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Entry
VPBB_0451 CDS
T02409
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00220
Arginine biosynthesis
vpb00240
Pyrimidine metabolism
vpb00250
Alanine, aspartate and glutamate metabolism
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
vpb01240
Biosynthesis of cofactors
Module
vpb_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VPBB_0451
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VPBB_0451
00220 Arginine biosynthesis
VPBB_0451
Enzymes [BR:
vpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VPBB_0451
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Epimerase
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
AGB08969
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Position
1:472304..475537
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AA seq
1077 aa
AA seq
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MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFDEMVDLDAPDA
LTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEEQVKAGG
FAGLTEEVLRQMKRKGFSDARLSKLLGVAESEIRRLRDQFDIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLSIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQAAVERLGLLQPQNATVTAMEQAVEKSREIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNTQFAVKDNEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVREGDKQRVVDLA
SKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMSHTADAKASVTSVQELHAKVKASLEA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgtactgacattcaaagtattctaattcttggtgctggtccgattgttatc
ggtcaggcatgtgagtttgactactctggcgcacaagcgtgtaaagctcttcgtgaagaa
ggctaccgagttattctagttaactctaacccagcaaccatcatgacagaccctgaaatg
gcagatgcaacatacatcgagccgattcaatgggaagttgttcgcaagatcattgagaaa
gaacgcccagatgcagtattgccaacaatgggtggtcagacggcgcttaactgtgcgcta
gatctagagaagcacggcgttcttgaagagttcggcgtagagatgattggtgcaacggct
gacgcgattgataaagcagaagaccgttctcgctttgataaagcgatgaagtctatcggc
cttgagtgtcctcgcgctgataccgcgaagacgatggaagaagcttacaaagttttagac
atggttggcttcccttgtatcatccgtccatcgttcaccatgggtggtacgggtggcggt
atcgcgtacaacaaagaagagttcgaagaaatctgtcgtcgcggtctggatttatctccg
accaacgaactgcttatcgatgaatcgctaatcggttggaaagagtacgaaatggaagtg
gttcgcgacaaagcggataactgtatcatcgtatgttcaatcgaaaacttcgacccaatg
ggcatccacactggtgactcaatcacggttgctccagcgcaaactctgactgacaaagaa
taccagctaatgcgtaacgcatcgctagcggttctgcgtgaaatcggtgttgagacaggt
ggttcaaacgtacagtttggtatcaacccgaaagatggccgtatggttatcatcgagatg
aacccacgtgtatctcgctcttctgctctggcatcaaaagcaacaggtttcccaatcgcg
aagattgcggcgaaactggctgttggctttactctagacgagctgcaaaacgacatcaca
ggtggtgcaactccggcatcattcgaacctactatcgactacgtagtgaccaagattcct
cgttttaacttcgagaaatttgctggcgctaacgatcgcctgacgactcagatgaagtca
gttggtgaggtaatggcgattggtcgtaaccaacaagaatctcttcacaaagcattacgt
ggcctagaagttggcgcgactggctttgatgagatggttgacctagatgcacctgacgca
ctgactaagattcgtcacgaactaaaagaagctggcgcagagcgtatctggtatatcgca
gatgcattccgtgcgggcatgtcagtggatggcgtgtttaacctgacgaacattgatcgc
tggttcctagttcaaattgaagagctagttaaactagaagagcaagtgaaagccggtggc
tttgctggtctaacagaagaagttctacgccagatgaaacgtaaaggtttctctgatgcg
cgcctatctaaactgttaggtgtggctgaaagcgaaatccgtcgtctacgtgaccagttt
gacatccacccggtctacaagcgtgtggatacgtgtgcggctgagttctcttctgacacg
gcttacatgtactcatcttacgatgaagagtgtgaagcaaacccaacagataaagacaag
atcatggtactgggcggtggtccaaaccgtatcggtcaaggtatcgaattcgactactgt
tgtgtacatgcatcactagcgcttcgtgaagatggctacgaaaccataatggtgaactgt
aacccagaaacagtatcgacagactacgatacatctgaccgcctttacttcgaaccagta
actcttgaagatgtgttgtctatcgcccgcgttgaaaagccaaaaggtgtgattgttcaa
tacggtggtcaaacgccacttaaactggctcgcgcactagaagctgcaggcgtgccaatc
atcggtacaagcccagatgcgattgaccgcgcagaagaccgtgagcgtttccaggctgca
gttgagcgtttaggtcttctacaaccacaaaacgcaacagtaacggcgatggagcaagcg
gttgagaaatctcgtgaaatcggcttcccactcgttgttcgtccatcttacgttttgggt
ggtcgtgcgatggaaatcgtctacgatgaacaagacttgcgtcgttacttcaacgaagca
gtaagcgtatcgaatgaatctccagttctactagaccgattcctagatgatgcaacagaa
gtggatatcgacgctatctgtgacggtgagcgcgtggttatcggcggcatcatggagcac
attgagcaagcgggcgttcactctggtgactctgcatgttcgcttcctgcctacacacta
agccaagaaatccaagacaagatgcgtgagcaagttgagaagctggcgttcgaacttggt
gttcgtggtctgatgaacacgcagttcgcagtaaaagacaacgaagtttacctaattgaa
gtaaaccctcgtgctgcgcgtacggtaccattcgtatcgaaagcgacaggtgcaccactg
gcgaaaatcgctgcacgtgtaatggcgggtcaatctctggaatcacaaggtttcactaaa
gagattattcctccttactactcagtcaaagaagtcgttctacctttcaataagttccct
ggcgttgaccctctattgggtcctgaaatgcgctcaacaggtgaagtgatgggtgttggt
gcaacgtttgcagaagcttacgcaaaagcagagcttggctgtggcagtgtgtaccctgaa
ggtggtcgtgcgctactttctgttcgtgaaggtgataagcagcgtgttgttgaccttgcg
tctaagctagtaaaattgggttaccaattggatgcgactcacggtactgctgtaatcttg
ggtgaagcgggtattaaccctcgcctggtaaacaaagtacatgaaggtcgtccacacatt
cttgaccgcatcaagaacaacgaatacacctacattgtgaacacggctgcaggtcgtcaa
gctattgaagattcgaaagttctacgccgcggtgctctagcagaaaaagtgaactacaca
acaacgctaaacgctgcgtttgcaacgtgtatgtctcacactgctgatgcaaaagcgtca
gtaacttctgttcaggagctacacgctaaagtaaaagcgagtctggaagcgtaa
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