Vibrio parahaemolyticus BB22OP: VPBB_0496
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Entry
VPBB_0496 CDS
T02409
Name
(GenBank) Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VPBB_0496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpb03019
]
VPBB_0496
Messenger RNA biogenesis [BR:
vpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VPBB_0496
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AGB09011
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Position
1:532655..533179
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AA seq
174 aa
AA seq
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MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAMFRELYEEVGL
TKKDVKIIATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRLECDESRINMQRGKSPE
FDGWRWVSYWYPVRQVVSFKRDVYRRAMKEFASLAMPFRERKAKGKRKKQQRRG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatggcgatggttaccgactgaatgttggtattgtgatatgtaataaccatggt
caggtcttctgggctaaacgatacgggcaacactcatggcaatttccacaaggtgggatt
gacgaaggtgaaacacctgaacaggcgatgttcagggagttgtatgaagaagtcggatta
acgaaaaaagacgttaagatcattgcaacaagtcgtcattggttaagatataaactacca
aagcgattggtgcgttgggactccaagcctgtttgtatcggccaaaaacagaaatggttt
ctgctgcgattggaatgcgatgaatcgcgcatcaatatgcagcgcgggaaatcccctgaa
tttgatggttggcgctgggtgagctattggtatccagttcggcaagttgtttctttcaag
cgtgatgtttatcgtcgagcgatgaaagagtttgcatctttagccatgccttttcgagag
agaaaagcgaaagggaaaagaaaaaagcaacaacgtagaggatag
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