Vibrio parahaemolyticus BB22OP: VPBB_0504
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Entry
VPBB_0504 CDS
T02409
Name
(GenBank) Transcriptional activator HlyU
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpb03000
]
VPBB_0504
Transcription factors [BR:
vpb03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
VPBB_0504
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
MarR_2
HTH_11
HTH_24
DUF7346
DUF7344
MarR
HTH_27
HTH_34
DUF2582
TFIIE_alpha
HTH_28
Mga
HxlR
HTH_IclR
Rrf2
HTH_45
DUF7347
Dimerisation
HTH_1
TrmB
DUF6432
Motif
Other DBs
NCBI-ProteinID:
AGB09018
LinkDB
All DBs
Position
1:542236..542532
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AA seq
98 aa
AA seq
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MNLQEMEKNSAKAVVLLKAMANERRLQILCMLHNQELSVGELCTKLELSQSALSQHLAWL
RRDELVATRKEAQTVYYTLKSDEVKTLIQTLHGLYCAN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaatctacaagaaatggagaaaaactccgcaaaagccgtcgtgttgctcaaagcgatg
gcaaacgaaagacgcctacaaattctttgtatgctgcataaccaagagttgtccgttggg
gagctgtgtaccaaactggaattaagccagtcggcgttatcgcaacatttagcttggctt
cgtcgtgacgaattggtcgcgacgagaaaagaagcgcaaacggtgtattacacgttaaaa
agtgatgaggtgaagacattgattcaaacccttcacggtctttattgcgcaaactga
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