Vibrio parahaemolyticus BB22OP: VPBB_0556
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Entry
VPBB_0556 CDS
T02409
Name
(GenBank) Malate synthase
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00620
Pyruvate metabolism
vpb00630
Glyoxylate and dicarboxylate metabolism
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
vpb01120
Microbial metabolism in diverse environments
vpb01200
Carbon metabolism
Module
vpb_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
VPBB_0556
00630 Glyoxylate and dicarboxylate metabolism
VPBB_0556
Enzymes [BR:
vpb01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
VPBB_0556
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
DUF6986
Motif
Other DBs
NCBI-ProteinID:
AGB09068
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Position
1:605071..606699
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AA seq
542 aa
AA seq
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MLAQTEQKTQPSQQTQGMLEVTGALAPEHQAIFPVEAQTFLSLLCEKFAGRVEELLEARE
EKQARIDAGELPDFLPDTQDIREGSWKILGIPQDLQDRRVEITGPTDRKMVINALNANVK
VFMADFEDSMSPAWDKVLDGQVNLRDAVNGNISYTNPSNGKHYQLVDEPAVLICRVRGLH
LKEKHVTWHGQIIPGALFDFALYFYNNHKALLQKGSGPYFYLPKLQSYHEAKWWSEVFHF
TEEYFGLETGTIKATVLIETLPAVFEMDEILFSLKEHIVGLNCGRWDYIFSYIKTLKKHP
DRVLPDRQVVTMDKPFLNAYSRMLVRTCHKRGAFAMGGMAAFIPAKDPQENQKVLDKIHN
DKSLEANNGHDGTWVAHPGLADTAMEVFSAALGERTNQLDVSRSEDAPITAAELLEPCDG
ERTEEGMRHNIRVALQYIEAWISGNGCVPIYGLMEDAATAEISRASIWQWIQHGKSLDNG
QQVTKALFETYLQEEVEVVKQEVGEERYQAGRFEEAAQLMAKLTTSDELTNFLTVPGYDY
LD
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctcagacagaacaaaaaacacaaccatcacagcaaacccaaggcatgcttgag
gtgactggagcacttgctccggagcatcaagctattttccctgttgaagcccaaaccttt
ttatctctgctgtgtgaaaaatttgctgggcgtgttgaagagttgttggaagcgagagaa
gaaaagcaagcacgcatcgacgctggggagttgccagacttcctgcctgacacacaagat
attcgtgaaggtagttggaagatcttaggtattcctcaggatctacaagatcgccgtgtt
gagattacaggcccaacagatcgcaaaatggtgatcaacgctttgaatgcaaatgtaaaa
gtattcatggcggatttcgaagactctatgtcgccagcttgggacaaggttctcgatggt
caagttaacttgcgagatgccgttaatggcaacattagctacaccaaccctagcaatggc
aagcattatcagctggtggacgagccagcggtgttgatctgccgtgttcgcggccttcac
ttaaaagaaaaacacgtgacgtggcacggtcagatcattccaggcgcgctttttgatttt
gcactgtatttctacaataaccacaaagcattgcttcaaaaaggcagcggtccatatttc
tatcttcctaaactgcagtcttatcatgaggcgaagtggtggagtgaagtgttccatttc
acagaagaatattttggtttagagactggcacgatcaaagcgaccgtgctgatcgaaacg
ttaccagctgtgtttgagatggatgagattttgttctcacttaaagagcatatcgtaggg
ctgaattgtggtcgttgggattacattttcagttacatcaaaacactgaagaaacaccca
gatcgtgttctgccggatcgccaagtcgtcaccatggacaaaccatttttgaacgcctat
tcgcgtatgttggttcgtacttgtcacaagcgtggtgctttcgcgatgggaggaatggcc
gcctttattcccgcgaaagacccgcaagaaaaccagaaagtgttggataaaattcacaac
gataaatcacttgaggcgaataacggtcacgacggtacgtgggttgcccacccgggtcta
gccgatactgctatggaagtattcagtgcggcacttggagagcgaacaaatcaactagat
gttagtcgctccgaagatgcgccaattaccgcagccgagttgctagaaccgtgtgacggt
gaacgtacagaagaaggcatgcgccacaacattcgcgttgcgctgcaatacatcgaagct
tggatttctggaaacggctgtgtaccaatctacggattaatggaagatgctgcgactgct
gagatttctcgcgcctcaatctggcaatggattcagcacggtaagtcactcgacaatggt
caacaggtgacaaaagcactgttcgaaacctacttgcaagaagaagtagaagtagtgaaa
caagaagtgggcgaagaacgttatcaagccgggcgttttgaagaagccgcacaattgatg
gcgaagctaacaactagtgatgagctaaccaacttcttaaccgttcctggttatgactac
ctagactaa
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