Vibrio parahaemolyticus BB22OP: VPBB_0560
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Entry
VPBB_0560 CDS
T02409
Name
(GenBank) S-adenosylmethionine:tRNA ribosyltransferase-isomerase
KO
K07568
S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:
2.4.99.17
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpb03016
]
VPBB_0560
Enzymes [BR:
vpb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.17 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
VPBB_0560
Transfer RNA biogenesis [BR:
vpb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VPBB_0560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Queuosine_synth
DUF5427
Motif
Other DBs
NCBI-ProteinID:
AGB09072
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All DBs
Position
1:610437..611489
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AA seq
350 aa
AA seq
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MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTGELIDGTFTDVLNQVQAGDLVVFNN
TRVIPARMFGRKESGGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEHDEYSAEMV
ARHDALFELKFNSDKTVLEILEEIGHMPLPPYIDRPDEDADKERYQTVYNQKPGAVAAPT
AGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHMHAEYVEVPQEVVDAI
NATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIFIYPGYEYQLVDCLIT
NFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFIKKKTI
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtatcagatttccatttcgaccttccagatgaactcatcgctcgttaccctcaa
ccagagcgtaccgcaagccgactactacaaatggacggcaatactggcgagcttatagat
ggcacatttaccgatgtgttaaaccaagttcaagctggtgacttagtggttttcaataat
acccgtgttattccagcgcgtatgtttggtcgtaaagaatctggcggtaagttagaggtg
ctagtggagcgcatgctagatgagaaaagcattcttgcgcacgttcgctgctctaaatca
ccaaaaccaggcactactattattgtgggcgagcatgacgaatactcagcggaaatggtg
gctcgtcacgacgccctattcgaactgaaatttaactctgataagacggtattagaaatc
cttgaagaaattggccacatgccacttcctccatacattgaccgcccagatgaagacgca
gataaagagcgttaccaaaccgtatataaccaaaaaccaggcgcagtagcagcacctacg
gctggcctgcactttgatgacgttcttttagataagatcaaagccaaaggcgctgagttt
gcttacgttacactacacgtcggtgcaggtacgttccaacccgtaaaagtggataatatc
aacgatcaccacatgcatgcagagtatgtagaagtaccgcaagaagtggtggatgccatc
aatgcaaccaaagctcgcggtggtcgtatcatcgcagtgggtacaacatcagtacgttca
ctcgaaagtgcagcgcaagatgcattgaagaaaggcactgaattggttccattcttcggc
gatactgaaatttttatctaccctggttacgaataccagctggtggattgcttgatcacg
aacttccacttaccagaatcaacattgatcatgttggtgagtgcgtttgctggctacgag
aacaccatgaatgcttacaagcatgcggtggaaaacaaataccgcttcttctcgtacggt
gactcgatgttcatcaaaaagaaaacgatttag
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