Vibrio parahaemolyticus BB22OP: VPBB_0802
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Entry
VPBB_0802 CDS
T02409
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00020
Citrate cycle (TCA cycle)
vpb00190
Oxidative phosphorylation
vpb00650
Butanoate metabolism
vpb00720
Other carbon fixation pathways
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
vpb01120
Microbial metabolism in diverse environments
vpb01200
Carbon metabolism
Module
vpb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vpb_M00149
Succinate dehydrogenase, prokaryotes
vpb_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VPBB_0802
00650 Butanoate metabolism
VPBB_0802
09102 Energy metabolism
00190 Oxidative phosphorylation
VPBB_0802
00720 Other carbon fixation pathways
VPBB_0802
Enzymes [BR:
vpb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VPBB_0802
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Thi4
Pyr_redox_2
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AGB09307
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Position
1:872299..874065
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AA seq
588 aa
AA seq
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MSIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGNS
HKDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELEKMGLPFSRFDNGTIYQRPFG
GQSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQDGAIMGC
TAICMETGEICYFKSKATILATGGAGRIYASTTNAHINTGDGVGMALRAGVPMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHIKLKLDHLGKEVLESRLPGICELSRTFAHVDPVKEPIPVIPTCHYMMGGV
PTQVSGQAIKQLADGSEAEVQGLYACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHLG
ETLAAQVEARPATESDIEASLARTMRWENSTGGEDPVQIRKDLQRCMQNSFSVFREGDAM
ATGLEELKVIRERLKDAHLADKSSEFNTQRIECLELDNLMETAFSTAVAANYRTESRGAH
ARFDFPDRDDENWLCHSIYNPETEAMTKRDVNMTPVHRDAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgtctattccagttcgtgagtttgatgccgtagtaatcggcgctggtggtgcaggtatg
cgcgctgcactacaaatttcggaacaaggcctttcttgtgctttgttgtctaaagtattc
ccaacccgttctcatactgtatctgctcaaggcggtatcacagttgcgcttggtaactcg
cataaggacgattggcaatggcacatgtacgacacagtaaaaggttctgattacattggt
gaccagaacgcgattgaatacatgtgtaaaaatggtcctgagtcagttatcgagctagaa
aaaatgggtcttccattctctcgttttgataacggtaccatctaccaacgtccattcggc
ggtcagtcaaaagagtttggtggtgagcaggcggcgcgcacagcagctgcagcagaccgt
acaggtcacgctcttcttcatacgctttaccaacaaaacgtcaaacataagacaaccatc
ttttctgaatggtacgctttggatcttgtgaaaaaccaagatggcgcaatcatgggttgt
actgcgatctgtatggaaacgggtgaaatctgttacttcaaatcgaaagcaacaattcta
gctactggtggtgccggtcgtatttacgcatcgacaactaacgcgcacatcaacacgggt
gatggcgttggtatggcacttcgtgcaggcgttccaatgcaagacatggaaatgtggcag
ttccacccaacgggtattgctggcgcgggtgttcttgtgacagaaggctgtcgtggtgaa
ggtggttaccttctaaacaaagacggcgaacgctttatggaacgttacgctccaaacgcg
aaagaccttgctggtcgcgacgttgttgctcgctctatgatgattgaaatccgtgaaggc
cgcggttgtgatggcccttggggtccacatatcaagttgaaacttgatcaccttggcaaa
gaagtacttgaatcacgtctgccaggtatctgtgaactgtctcgtacattcgcacacgtt
gatccagtgaaagaaccaattccagtaattccaacttgtcactacatgatgggtggtgtt
ccgactcaagtttctggtcaagcgattaagcaacttgcggatggcagcgaagcggaagtt
caaggtctatacgcttgtggtgaaattgcttctgtatctgtacacggtgcaaaccgtcta
ggtggtaactcactactagacttggtggtatttggtcgtgcaacaggcctacacctaggt
gagactcttgctgctcaagttgaagctcgccctgcaactgaatcagacatcgaagcttct
ctagcgcgcactatgcgttgggaaaacagcactggtggcgaagatccagtacaaatccgt
aaagacctacaacgctgtatgcaaaacagcttctcggtattccgcgaaggtgatgcaatg
gcgacgggcctagaagagttgaaggtaattcgtgaacgtctgaaagatgctcatttagcc
gacaaatcttctgagttcaacacgcaacgtattgagtgtctagaactagataacctgatg
gaaaccgcgttttcaacagcagttgcagcaaactaccgtacagaaagccgtggtgctcat
gctcgcttcgacttccctgatcgtgatgatgagaactggctatgccactctatctacaac
ccggaaaccgaagcgatgacaaagcgtgatgtaaacatgacgccagtacaccgtgacgcg
ttcccaccgaaagtacgtacatactaa
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