Vibrio parahaemolyticus BB22OP: VPBB_0910
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Entry
VPBB_0910 CDS
T02409
Name
(GenBank) GGDEF family member
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPBB_0910
Enzymes [BR:
vpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VPBB_0910
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Ortholog
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GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
Lig_chan-Glu_bd
Defensin_propep
Phosphonate-bd
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AGB09414
LinkDB
All DBs
Position
1:997215..999218
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AA seq
667 aa
AA seq
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MITLARTLLLFACLLLSLHVKAEPSLQPHYKIATEADDVVTRVLFDAVSTEFGVSVEYIN
YASFDAILDAVANEDADFAANITYTDTRAERFSYSRPTNIEYTYLYGLSDSTLDDISRVG
VPQNTIYSELIKQYHPELKQVPYKGHNEAVRLLQTGLVDGVVDAINQLKPMLLEGFDAKM
LNDQISIKPVSIISKKGHHLEELDTFASFIHGEAVQKQLREQIALYQFELRRSALRDAIK
LLPVNLKEPIRIKMESIFPYVVYNPDGTVQGMTADIVLQSCEILDLNCVIISEPNESWES
MYRQFMKGEFDILAPLTVSRERHEFSYFPRPHYSPASVMVKRLGYKPNTYSHVSQLISER
IGVVKDDFFDQMMTQLLPLKELERFNTQHDLIEALLKGEVDYIPMDTAMLNHFLRLSELV
PIEQDTAIGEFYSSQLSIGLVANERGAMLAPYFSRAIAMLGVDKIVAQYDLRPDWRTALE
YEVRLATQTQAVFLFVLVLAICVSLYLYRQSNTDNLTGLRNRRSLQVKYRQGVNKDLAIL
YLDINHFKQINDTYGHLAGDEVLQLLSLKIHRVWSGRSYRIGGDEFILLGYPTQIELSRA
VQELSRLDVTDKLCAELKTVTISVGVSEKRKQHMSLEQALHLADEDMYVSKHSSRHYSGS
SNYLVQS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatcacacttgctcgaacgctgctgcttttcgcttgtctgttgttaagccttcatgta
aaggccgaaccttcattacagcctcactataaaattgcgacggaagcggatgatgttgtc
actcgcgttttatttgatgcggtatccactgaatttggtgtgagtgttgagtacatcaac
tacgcgagttttgatgccattttagatgcagtcgcgaatgaagacgcggactttgctgcc
aacattacctataccgatactcgcgccgagcgtttcagctattcccgaccaacaaacatt
gaatacacatacttatatggactgagcgactcgacattagatgatatttcgcgtgttggt
gtgcctcaaaacaccatctactcagaactgatcaaacagtatcatccagagttaaaacaa
gttccctataaaggccataatgaagcagtacgtttgctacaaactggtttagtggatggc
gtggttgatgcgattaaccaacttaaaccaatgttgttggaagggtttgatgcaaaaatg
ctcaacgatcagatctccatcaaacctgtttctatcattagtaaaaaaggtcaccactta
gaagagttggatacctttgcctcgtttattcatggtgaagcggtacaaaagcaacttcgt
gagcaaatcgcgttgtatcaatttgagttgagacgttcagccctgcgagatgcgatcaag
ttactgcctgtcaatttaaaagagccaattcgaatcaaaatggaatccatctttccttac
gtggtgtacaaccctgatggcaccgtacaagggatgacagccgatatcgttctacaaagc
tgtgaaattctggatttaaactgtgtgatcatcagtgagcctaatgaaagttgggagtcg
atgtatcgccagtttatgaaaggtgaatttgatatattggcaccattgacggtgagcaga
gaacggcatgaattcagctatttcccaagaccgcactattcaccagcttcagtgatggtc
aagcgattgggttacaagccaaacacctattcccatgtgtcacaattgatctctgaaaga
atcggtgtagtcaaagacgatttcttcgatcaaatgatgactcagcttttaccgttgaaa
gagcttgagcgttttaacacgcagcacgatcttattgaagcattgcttaaaggggaggtg
gattacatcccgatggatacggcaatgctcaaccatttccttcgtttgagcgagcttgtg
cccatcgagcaagatacggcgataggggagttttacagttcgcagttgtctatcggtctc
gtcgcgaatgaacgcggtgcaatgttagcgccatattttagccgcgcgatcgcgatgttg
ggcgttgacaaaattgtggctcaatacgatttacgtccagattggcgcacggcgttagag
tatgaggtgcgattggcaacacaaacccaagcggtatttctattcgtacttgtattggca
atttgtgtttctctctatctgtatcgtcaatccaacaccgataatttaactgggttgagg
aatcgtcgctctttgcaagttaagtatcgccaaggggtgaacaaggatttggcgatactt
tatttagatattaatcacttcaaacaaatcaacgatacctacggtcatttagcgggtgat
gaagtgctgcaattgctttcgctgaagatacatcgagtgtggtctgggcgtagctatcgt
attggcggtgacgaatttattttgctcggatacccaacacaaatagagctttcgcgagcc
gttcaagaactgagtcgattggatgttactgataaattgtgcgcagagctgaaaactgtc
acgatttcagttggtgtttctgagaaacgaaagcagcacatgagcttggaacaagcgctg
catttggcggatgaagacatgtacgtcagcaaacattcttctcgtcattattctggttct
agcaactatcttgttcagtcttaa
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