Vibrio parahaemolyticus BB22OP: VPBB_0998
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Entry
VPBB_0998 CDS
T02409
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VPBB_0998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpb03400
]
VPBB_0998
DNA repair and recombination proteins [BR:
vpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VPBB_0998
RecFOR pathway proteins
VPBB_0998
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
RecR_HhH
HHH
IMS_HHH
HHH_8
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AGB09499
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All DBs
Position
1:1105100..1105771
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AA seq
223 aa
AA seq
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MSIQFFIILSQIHFQRVFIVIGRLRGILLEKQPPEVLIEVNGIGYEVQMPMSCFYELPNI
GEEAIIYTHFVVREDAQLLYGFNTVKERALFREVIKANGVGPKLGLGILSGMTASQFVSC
VEREDVSTLVKLPGVGKKTAERLVVEMKDRLKGWGAGDLFTPFTDAAPTDSAAASSNSAE
EEAVSALLALGYKPTQASKVVSQIAKPDMSSEQLIREALKSMV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtctatccagttctttattatcctgtcgcaaattcatttccaaagagtatttatagtg
attggacgtcttcgcggcattttgcttgaaaagcaaccacctgaagttttaattgaagtt
aacggcattggctatgaagttcagatgccaatgagctgtttctacgaactgccaaatatc
ggcgaagaagcgattatttatactcattttgttgtgcgtgaagacgcgcaattgctttac
ggttttaatacagtaaaagagcgtgcgctattccgtgaagtgatcaaagcaaacggcgtt
ggccctaaacttggcttgggtattctttcaggcatgacagcgagccagttcgtgtcttgt
gtagagcgtgaagatgtttctacgcttgtgaagttacctggtgttggtaagaaaaccgcc
gagcgtttggtcgttgaaatgaaagaccgcttaaaaggttggggagctggcgacttattc
acgccgtttactgatgccgctcctactgactcggctgccgcttcgtcaaatagtgcagaa
gaagaggcggtcagcgcacttcttgctctaggctacaagccaactcaagcgtcgaaagta
gtttctcaaattgctaaaccggacatgagcagcgagcagctgatccgtgaagcactaaaa
tcaatggtgtaa
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