Vibrio parahaemolyticus BB22OP: VPBB_1060
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Entry
VPBB_1060 CDS
T02409
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpb03036
]
VPBB_1060
03400 DNA repair and recombination proteins [BR:
vpb03400
]
VPBB_1060
Chromosome and associated proteins [BR:
vpb03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
VPBB_1060
DNA repair and recombination proteins [BR:
vpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VPBB_1060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
CUX1_N
MRP-S27
DUF3037
RmuC
Knl-2-like_dom
MAT1
SIM_C
GTA_holin_3TM
RGS-like
Motif
Other DBs
NCBI-ProteinID:
AGB09560
LinkDB
All DBs
Position
1:complement(1170475..1170882)
Genome browser
AA seq
135 aa
AA seq
DB search
MSDLTKTLLNIRSLRAFSRELTLEQLEEALDKLTTVVEERREAEEAEREALAQQEAKLAE
IAEKIAQDGIDVEALISALSGETKTKAKSKRAPRPAKYKYIDTNGQEKTWTGQGRTPSAI
QEQLDAGKSLDDFLI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctgactaaaacacttctaaatatccgtagccttcgtgcattttctcgtgag
ctgactctagaacaattggaagaagctctagataaactaactactgttgttgaagagcgt
cgtgaagctgaagaagcagagcgtgaagcactagcacaacaagaagctaagctagcagag
attgcagaaaaaattgctcaagacggtatcgacgttgaagcactaattagcgcactatct
ggcgaaactaagactaaagcaaaatctaagcgcgctcctcgcccagctaagtacaagtac
atcgacacaaatggccaagaaaaaacttggacaggccaaggtcgtacaccttctgcaatt
caagagcaacttgacgcaggtaaatcactagacgatttcctaatctaa
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