KEGG   Vibrio parahaemolyticus BB22OP: VPBB_1060
Entry
VPBB_1060         CDS       T02409                                 
Name
(GenBank) DNA-binding protein H-NS
  KO
K03746  DNA-binding protein H-NS
Organism
vpb  Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vpb03036]
    VPBB_1060
   03400 DNA repair and recombination proteins [BR:vpb03400]
    VPBB_1060
Chromosome and associated proteins [BR:vpb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    VPBB_1060
DNA repair and recombination proteins [BR:vpb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      VPBB_1060
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS CUX1_N MRP-S27 DUF3037 RmuC Knl-2-like_dom MAT1 SIM_C GTA_holin_3TM RGS-like
Other DBs
NCBI-ProteinID: AGB09560
LinkDB
Position
1:complement(1170475..1170882)
AA seq 135 aa
MSDLTKTLLNIRSLRAFSRELTLEQLEEALDKLTTVVEERREAEEAEREALAQQEAKLAE
IAEKIAQDGIDVEALISALSGETKTKAKSKRAPRPAKYKYIDTNGQEKTWTGQGRTPSAI
QEQLDAGKSLDDFLI
NT seq 408 nt   +upstreamnt  +downstreamnt
atgtcagatctgactaaaacacttctaaatatccgtagccttcgtgcattttctcgtgag
ctgactctagaacaattggaagaagctctagataaactaactactgttgttgaagagcgt
cgtgaagctgaagaagcagagcgtgaagcactagcacaacaagaagctaagctagcagag
attgcagaaaaaattgctcaagacggtatcgacgttgaagcactaattagcgcactatct
ggcgaaactaagactaaagcaaaatctaagcgcgctcctcgcccagctaagtacaagtac
atcgacacaaatggccaagaaaaaacttggacaggccaaggtcgtacaccttctgcaatt
caagagcaacttgacgcaggtaaatcactagacgatttcctaatctaa

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