Vibrio parahaemolyticus BB22OP: VPBB_1432
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Entry
VPBB_1432 CDS
T02409
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VPBB_1432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpb02000
]
VPBB_1432
Transporters [BR:
vpb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
VPBB_1432
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Lipoprotein_8
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
AGB09914
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All DBs
Position
1:complement(1608577..1609644)
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AA seq
355 aa
AA seq
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MIWTTFGLELTSMKKWATLLAGSACALSLFSGSAAADDKELVFMNWGPYINSNILEQFTK
ETGIKVIYSTYESNETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGN
LDKNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDFQSWADLWKPELEGQVMLMDDT
REVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGMLW
NGSAAAAQNEGLNLKLVFPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAEQISR
DTGYLTAVTESNSKFKDVAPLFPSQEDLDRVEWQDSVGDMTVKYEDYFLKLKAGQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatttggacaacgtttggtttggagctaacgtcaatgaaaaaatgggctactctatta
gctggtagtgcatgtgcgctttctctgttctcaggttcagcggcagcggacgataaagaa
ttggtatttatgaactggggtccttacatcaacagtaatatcctagagcaatttactaaa
gaaacaggtatcaaagtgatctactcgacttacgagtcgaacgaaactttgtacgcaaag
ctaaaaactcataaccaaggttatgacctagtcgtgccttcaacttacttcgtagcaaaa
atgcgcgatgaaggtatgctacaaaagatcgataagactaagctgaaaaacttcggcaac
ctagataagaactacctagataagccttacgatccaaataacgactactctattccacac
gttgttgcgattacaggtctagcagttaacgctgatatgtacgatccaaacgacttccaa
agctgggcagacctatggaagcctgagcttgaaggtcaagtaatgctaatggacgatact
cgtgaagtattccacattgccctacgtaaattgggttactcaggtaactctacagatcca
aagcaaatcgacgaagcatacgctgaattgcaaaagctgatgccaaacgttctagtattt
aactctgataacccgggtgcaccatacatgtctggcgaagttggcgttggtatgctttgg
aacggcagtgcggctgcggcgcaaaacgaaggtctaaaccttaagctagtcttccctaaa
gaaggcggtattggctgggttgataacttcgcaatctcttctggcgcgaaaaacgtagaa
gcagcgcacaaaatgatcgacttcctactacgccctgaaatcgcagagcaaatttctcgt
gacactggctacctaaccgccgttacagaatcaaactcgaagtttaaagacgtagcaccg
ctgttcccttctcaagaagatcttgaccgtgttgaatggcaagactcggttggtgatatg
acagtgaaatatgaagactacttcttgaagctgaaagcgggtcaataa
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