Vibrio parahaemolyticus BB22OP: VPBB_1490
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Entry
VPBB_1490 CDS
T02409
Name
(GenBank) T1SS secreted agglutinin (RTX)
Organism
vpb
Vibrio parahaemolyticus BB22OP
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LapA
Lyase_8_C
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
AGB09970
LinkDB
All DBs
Position
1:complement(1677158..1681993)
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AA seq
1611 aa
AA seq
DB search
MERVTFGSLMSNIVVIGLDGEIRTLEQGQLPKPGELIINEVSDTSELVIEQVTPQGSSIN
VTGDITALIEAIAAGQDPTQLGQEFETAAGEANGSSPQTTGNVARTGTELLASTNFETVG
TEGAGFSTTQILTLLDILPPTQAPAPTGIPIPVTITVQDISSPAVDEGQQVSFDVTLNQP
TEEETTIEFTLNDGSALGGAASDVGADYVNTTVLITLSDGTTQEIQVNDDGSFTVSLPIG
EESFTVSLDTIDDNLAEGSETFSLSGSTPDQPTPVTGVATITDEAEQGPEDTVTVTMTGP
ANVVEGDTTTEYTVTLSDPAPVGSIVTLAYSYTTASGDDITETTQAIIGADGVTATFTID
TVDDVYAEGDEVFRVSVSGIVDGDSNPIFEALDVSNAFVDTTISDETDPGPEDTVTVTMT
GPANVVEGDTTTEYTVTLSDPAPVCSIVTLAYSYTTASGDDITETTQAIIGADGVTATFT
IDTVDDVYAEGDEVFRVSVSGIVDSDSNPIFEALDVSNAFVDTTISDETDPGPEDTVTVT
MTGPANVVEGDTTTEYTVTLSDPAPVGSIVTLSYSYTTASGDDITETTQAVIGADGVTAT
FTIDTVDDVYAEGDEVFRVSVSGIVDSDSNPIFEALDVSNAFVDTTISDETDPGPEDTVT
VTMTGPANVVEGDTTTEYTVTLSDPAPVGSIVTLSYSYTTASGDDITETTQAVIGADGVT
ATFTIDTVDDVYAEGDEVFRVSVSGIVDSDSNPIFEALDVSNAFVDTTISDETDPGPEDT
VTVTMTGPANVVEGDTTTDYTVTLSDPAPVGSIVTLAYSYTTASGDDITETTQAVIGADG
VTATFTIDTVDDVYAEGDEVFRVSVSGIVDGDSNPIFEALNLDNAFVDTTISDETDPGPE
DTVTVTMTGPASVVEGDTTTEYTVTLSDPAPVGSIVTLAYSYTTASGDDITETTQAIIGA
DGVTATFTIDTVDDVYAEGDEVFRVSVSGIVDSDSNPIFEALNLDNAFVDTTISDETDPG
PEDTVTVTMTGPANVVEGDTTTEYTVTLSDPAPVGSIVTLAYSYTTASGDDITETTQAII
GADGVTATFTIDTVDDSDDEPDEVYRVSVASIVDGDDNPIFEALDLTNAYVDTTIIDNDE
PNTPPTVRNFNILLDVEDGLFPIHDVDFDGTTSGGEQRVEDLEDDAVTANDDDIQIKVID
LPDYGELYYVDGNGQEVVIDGSSIFAENTDVKYRLTADFFEDQRFDSNDLLEEFDKDFLA
DSVDVNGLSFYGGQITISGNDITFDSNAQVKVDFANQQVGLVVVSPGETGNGDEISTHEY
VAIKLDEGLEADKAKINLASLNDRFNNGGAWITAYIFLDGIVVDTQEIRAEDISYSGNHE
GTATIELANGSFDEIRLSPDTDSSSDKASFTLVGTEITSFTQVSDSLEYKAIDSDGLESD
SSATVAVDFENVTVDAVTALGYQTMALNSELNLIMGTDGDDILVGTDGNDMIIGGLGNDI
LTGGEGDDVFKWTEMQSATDTVTDFSDGDQLDFTDVFDDMTGTDISALLDDLGSGDYRGR
VDDITVEVTESGGNSTLTINKDGQQLEVNFDGASAADIANSLISNLEQLRE
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggaacgagtaacttttggctcattgatgagtaatattgtagttatcggtctcgatggg
gaaattagaaccctcgaacaaggacagttgcctaaaccaggggaactaattattaacgaa
gtttcagacacttcagaactggtcattgagcaagtgacaccgcaaggcagttccatcaat
gtaactggtgatattactgcgttgatagaagctattgcagcgggacaagacccgacccaa
ctaggtcaagagtttgaaaccgcagcgggcgaagcaaatgggtctagtcctcagacaaca
gggaatgttgcacgaacagggacagaattgctcgctagtaccaactttgagacagttggc
actgaaggcgcgggattctcaaccactcagattctaactttattggacattctccctcca
actcaggcaccagctccgacaggaattccgattccagtaacaattacggtgcaagatatt
tctagccctgcagtagatgaagggcagcaagtctctttcgacgttacccttaatcaacca
acggaagaagaaactaccattgagtttacccttaatgatggttctgctttgggaggggcg
gcgagcgatgtaggtgcagattatgtaaatacaacggttttaattacattatccgacgga
accacccaagaaattcaggtgaatgatgatggatcgttcactgtttctctgccgatcggg
gaagagtcttttacggttagcttggataccattgatgataatttagcggaaggatcggaa
acattcagtttgtccggttcaacgccagatcagcctactccagttacgggtgttgcaacg
attacagatgaggcagagcaaggtccagaagataccgttaccgtgaccatgaccggtcca
gcgaatgtggtggaaggcgacaccaccacagagtataccgtgacactgagcgatccggcg
cctgtgggtagcatcgtgaccttagcttatagctacaccactgcgtcaggtgatgacatc
accgaaaccactcaagccattattggtgccgatggtgtgacggctacatttaccattgat
accgtggatgatgtttacgcggaaggcgatgaagtgttccgcgtcagcgtgtcgggcatt
gtagatggtgacagcaatccgatttttgaagcattagatgtttcaaatgcctttgttgat
accaccatcagcgatgaaaccgacccagggccagaagatacggtcaccgtcaccatgaca
ggtccagcaaatgtcgtagaaggcgacaccaccacagagtacaccgtgacactgagcgat
ccggcgccagtctgtagcatcgtgactttagcttacagctataccactgcatctggtgat
gacatcaccgaaaccacccaagcgattattggtgccgatggcgtaacagcgacgtttacc
atcgatacggtggacgatgtgtatgccgaaggcgatgaagtgttccgcgtcagcgtgtcg
ggtattgtagatagcgatagcaatccaatctttgaggcattagatgtatcaaatgccttt
gttgataccaccattagcgatgaaacagacccaggcccagaagatacggtcaccgtcacc
atgacaggtccagcgaatgtcgtagaaggcgataccaccacagagtacaccgtgacgctg
agcgatccggcaccagtcggtagtatcgtgaccttatcttatagctacaccaccgcgtca
ggtgatgacatcactgaaaccactcaagcagtgattggtgcggatggcgtaaccgccacg
tttaccatcgatacggtggacgatgtgtacgccgaaggcgatgaagtgttccgcgtcagc
gtgtcgggcatcgtcgatagcgacagcaatccaatctttgaggcattagatgtttcaaat
gcctttgttgataccaccatcagcgatgaaaccgatccgggtccggaagatacggtcacc
gtcaccatgacaggtccagcgaatgtcgtagaaggcgataccaccacagagtacaccgtg
acgctgagcgatccggcaccagtcggtagtatcgtgaccttatcttatagctacaccacc
gcgtcaggtgatgacatcactgaaaccactcaagcagtgattggtgcggatggcgtaacc
gccacgtttaccatcgatacggtggacgatgtgtacgccgaaggcgatgaagtgttccgc
gtcagcgtgtcgggcatcgtcgatagcgacagcaatccaatctttgaggcattagatgta
tcaaatgcctttgttgataccaccatcagcgatgaaacggatccgggtccagaagatacg
gttaccgtgaccatgacaggtccagcgaatgtcgtagaaggtgataccaccacggactac
accgtgacactgagcgatcctgcgccagtcggtagcatcgtgaccttagcttacagctac
accacggcatccggtgatgacatcactgaaaccactcaagcagtgattggtgccgatggt
gtgaccgctacgtttaccatcgatacggtggacgatgtgtatgcagaaggcgatgaagtg
ttccgcgtcagcgtatcgggtatagtagatggtgacagcaatccaatcttcgaagcactg
aatctagataatgcgttcgtcgataccaccatcagtgatgaaaccgatccgggtccggaa
gatacggtcaccgtcaccatgacaggtccagcgagtgttgtagaaggcgacaccaccacg
gaatacaccgtgacactgagcgatccggcgccagtcggtagtatcgtgaccttagcttat
agctacactactgcatccggtgatgacatcactgaaaccactcaagcgattatcggtgcc
gacggtgtgaccgccacgtttactatcgatacggtggacgatgtgtatgcagaaggcgat
gaagtgttccgtgtcagcgtatcaggcattgtagatagcgacagcaacccaatcttcgaa
gcactgaatttagacaatgcgttcgtcgataccaccatcagtgatgaaactgatccaggt
ccagaagataccgttacggtaaccatgactggtccagcgaatgtcgtagaaggcgatacc
accacagagtacaccgtgacgctgagcgatccggctcctgtgggtagtatcgtgacctta
gcttacagctacaccactgcatcgggtgacgacattactgaaaccacccaagcgattatt
ggggcggatggcgtaaccgccacgtttaccattgacactgtcgatgattccgatgacgag
ccggatgaagtctatcgagttagtgtggctagtattgtcgatggtgacgacaatcctatt
ttcgaggcgcttgacctcactaatgcgtatgttgatacgaccatcatcgataatgacgag
ccgaatacgccgcctactgttcgtaacttcaacattctacttgatgtagaagacggtttg
ttcccaattcatgatgtagattttgatggaacaacaagtggtggtgagcagcgagttgaa
gaccttgaagatgatgcagtgacagcgaatgatgacgatatccaaatcaaagttattgac
cttccagattatggagaactctactatgtagatggtaacgggcaagaagttgttatcgat
gggtcatcaatatttgcagagaacactgacgttaagtatcgtctgaccgcagattttttt
gaagatcaacgttttgactcaaatgatttacttgaagagttcgacaaagattttctggct
gattctgtagatgtcaatggtttgagcttctatggtggccaaattactatttcaggaaat
gatatcaccttcgactctaacgctcaggtcaaggtcgattttgcgaaccagcaagttggt
ttggtcgttgtatctcctggtgagactgggaacggggatgagatcagcactcacgaatat
gttgcaataaaacttgatgaaggtcttgaagctgacaaagcgaaaataaatctcgcaagt
ttgaacgaccgctttaacaatggtggtgcttggattactgcatacattttcttagatggt
attgtggttgatactcaagaaatacgagcagaagacatcagctatagtggcaaccacgaa
ggtactgcaacgatagagcttgcaaacggaagcttcgatgaaattcggttgtcgccggat
acagatagctcaagtgataaagcaagttttacattggtaggcacagagattaccagcttc
actcaagtgagtgattcgcttgagtacaaagccattgattctgatggtttagaaagtgac
tccagtgcaacggtagcggttgatttcgagaacgtcactgtagatgctgtcacggcgctt
ggttatcaaaccatggcattaaattctgagctgaatctcatcatgggtacggatggagac
gatattctggttggtaccgacggtaatgacatgatcatcggtggtttaggcaacgatatc
ttaacgggcggtgaaggtgatgacgtattcaagtggacagaaatgcagtccgcaactgat
accgtgacggatttcagtgatggtgatcagcttgattttaccgatgtatttgatgatatg
acgggtactgacatttcagcattgcttgatgatcttggttctggagactaccgaggacgc
gtagatgatataaccgtagaagtgactgaaagtggaggtaactcgacattgacgattaat
aaagatggtcaacagttagaagttaatttcgatggcgcatcggccgcagatatcgccaac
agcttaatcagtaatctcgaacagttgagagaataa
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integrated database retrieval system
