KEGG   Vibrio parahaemolyticus BB22OP: VPBB_1522
Entry
VPBB_1522         CDS       T02409                                 
Name
(GenBank) Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
  KO
K03230  type III secretion protein V
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VPBB_1522
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpb02044]
    VPBB_1522
Secretion system [BR:vpb02044]
 Type III secretion system
  Type III secretion core apparatus
   VPBB_1522
SSDB
Motif
Pfam: FHIPEP TMEM232
Other DBs
NCBI-ProteinID: AGB10001
LinkDB
Position
1:complement(1727612..1729729)
AA seq 705 aa
MNKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGANMSIAVVLLMLAIYI
TTPLEFSAFPAVLLITTLFRLSLSITTTRLILLQGDAGQIVYTFGNFVVGGNLVVGIVVF
LIITIVQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEK
ESQMYGSMDGAMKFVKGDSIAGLVIIIVNILGGVTIGVTQKGMSASEALELFAILTVGDG
LVSQIPALFIAITAGIIVTRVSHEDSADLGSDIGGQVTAQPRALLIGGVLLVLFALIPGF
PKITFLVLALVVGGGGFYLFYQQKKQTESESSDLPSFVAQGAGSPAAKPNKPTPSRGSKG
KLGEQEEFAMTVPLLIDLDSSLQESLEAVALNDELARVRRALYLDLGVPFPGIHLRFNDG
MKNGEYLIQLQEVPVARGRIEKDKLLVTEGSDQIELLGVPFEQDDDFLPGVSSLWVAQSY
QEKLTASHVGFLTPDRILTFHLSHVLKEYAQDFIGIQETRYLLEQMEGSYSELVKEAQRI
VPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYA
SGQNMLPAYLLDQSLEDTIRSGIRQTSAGSYLALDPSVTQQFVSDVKQTVGDLSRMPNKP
VLVVSMDVRRYVRKLIESEYYDLPVLSFQELTQQINIQPLGRVGM
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgaataagttgatcgatattctaaacaaggtagggcaacgcaaagacatcatgctcgca
gtgatgttgctggcgatcgtctttatgatgattttgcctttgccaactgcactagtagat
gtgctgatcggcgcaaacatgagtattgctgtcgtgttgctgatgttggcgatttacatc
accacgccactggagttttcggcgtttccggcagtattgctgatcacgacgctatttcgt
ttgtcgctgtcaatcaccacgacacgtttgattctgcttcaaggcgatgcgggtcaaatc
gtttacacctttggtaacttcgtcgttggcggcaaccttgtcgttggtatcgtggtcttc
ctgatcatcactattgtacagtttatggtgatcaccaaaggttcggagcgtgttgctgaa
gttagtgctcgattctctcttgacgccatgccgggcaaacagatgagtatcgacggtgac
atgcgcgctggagttatcgatgttcacgaggcgcgtcatcgccgttctctgatcgagaaa
gagagtcaaatgtacggctcgatggacggtgcaatgaagtttgtaaaaggcgactccatt
gcgggcttggtgatcatcatcgttaacatcttgggtggcgtcaccattggcgtcacgcaa
aaaggcatgagcgcgtcagaggcgcttgagctgtttgcgattttgaccgtaggcgatggc
ttggtgtcgcagattcctgcgctatttatcgcgatcaccgctggtattatcgttacgcgt
gtttcccacgaagactcggccgacttgggctccgacattggtgggcaagtcacggctcag
cctcgtgcactgttgattggtggcgtgctgctggtcttgttcgctctgattcctggcttt
ccgaaaattacattcctagtgctggctttggtggtcggtggcggcggtttttacctcttc
tatcaacagaaaaagcaaaccgaatctgaaagcagcgatctgccgagctttgtcgcgcag
ggagcgggttctcctgccgcaaaacctaataaaccaacgccgtctcgtggtagcaaaggc
aaattgggcgagcaagaagagttcgcgatgacagtgccactgcttatcgatctggattca
agcttacaagaaagcctagaagccgtcgcactgaacgacgaactcgccagagtaagacgc
gcgttgtatctcgatcttggtgtaccgtttccgggaattcacctgcgttttaacgacggg
atgaaaaacggcgaatacttgattcagttgcaagaagtgcccgttgcacgtggtcgcatt
gagaaagacaaattgctggtcacagaaggaagcgaccagattgagttgcttggtgtgccg
tttgagcaagatgacgacttcctcccgggagtctcgagtctttgggtcgcacaaagctat
caagagaagttgactgcgagccatgtcggattccttacaccagaccgtattttgacgttc
catctatcacacgtattgaaagagtacgcgcaagacttcattgggattcaagaaactcgc
tacctacttgagcaaatggaaggcagttattctgaactggtgaaagaggcgcagcgcatc
gtcccgctacaaaaaatgacggagattttgcaacgtttggtgtctgaggacatttcgatt
cgtaaccttcgtgtcattttggaggccatggtcgaatggggacaaaaggaaaaggatgtt
gttcagttgacggaatacattcgttcaagcttaaagcgttacatctgttacaagtacgcg
agcggtcagaacatgttgccggcgtatcttctcgatcagagcctcgaagacaccattcgc
agcggtattcgacaaacctcggcgggcagctacttagcgcttgatccttcggttacgcag
caatttgttagcgacgtaaaacagactgtaggcgatttaagccgtatgccgaacaagcct
gttctggtggtttctatggatgtgcgtcgttatgttcgaaagctgattgaatccgaatat
tacgatttgcccgttctgtcttttcaagaactcactcagcagatcaacattcagccactt
ggacgggtagggatgtaa

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