KEGG   Vibrio parahaemolyticus BB22OP: VPBB_1554
Entry
VPBB_1554         CDS       T02409                                 
Name
(GenBank) Type III secretion inner membrane protein (YscD, flagellar export protein-like protein)
  KO
K03220  type III secretion protein D
Organism
vpb  Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpb02044]
    VPBB_1554
Secretion system [BR:vpb02044]
 Type III secretion system
  Type III secretion core apparatus
   VPBB_1554
SSDB
Motif
Pfam: Yop-YscD_ppl_1st Yop-YscD_ppl_2nd Yop-YscD_cpl Yop-YscD_ppl_3rd Y4YQ_C FHA TPR_TNPO3_IPO13_4th
Other DBs
NCBI-ProteinID: AGB10033
LinkDB
Position
1:complement(1752367..1753668)
AA seq 433 aa
MQQWKIRILSGVHSGVEVTLPEGALVLGSDDFIADLVLSDAGVAANHFTLVCDSESVMLR
GCQDVTINGENRAVGESGIELERHAVISVGVVKFALGNVEDELIVTNVTDAQTKQDAPVV
TAQSTSWKRTALIAVLCSAIPSAIFAGMWYSQANGNDSEVVAEAEPIVLVRNILNELGLN
DVRVEWNATAHQAVLEGYVEDRTQKLQLLGRIDVLGINYKSDLRTMEEIRRGVRFILRNL
GYHQVKVENGDETGTLLLTGYIDDASKWNQVEQILERDVPGLVAWKVELQRAGAYMDTLK
ELLTNAELLKKVQLVTSGDRIEVRGELDDIETTRFYGVTRDFREQYGEKPYLVLKSIPKV
SKGTDIDFPFRSVNFGQVPYVILTDNVRYMVGARTPQGYRISSVTPAGIELVKGGRVITI
ELGYEGEKNHDKS
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgcagcaatggaaaattcgtattttatccggcgtgcattccggggttgaagtcacactg
ccagaaggcgcattggttttaggtagcgacgactttatcgcagaccttgtgttgtcggat
gcgggcgtagcagccaatcacttcactttagtgtgtgacagtgaatcggtgatgttgcgt
ggatgtcaggacgtaaccatcaacggtgaaaaccgagcggttggtgaatcgggcatcgag
ctagagcgccacgcggtgatctctgttggcgtggtgaaatttgcactgggtaacgttgaa
gacgagctgattgtcaccaacgttacggatgctcaaaccaaacaagatgcaccagtcgtt
actgcgcaaagcacaagctggaaaagaaccgcactgatagccgtgctgtgcagcgcgata
ccaagcgcgatattcgctggcatgtggtacagccaagccaatggcaatgacagtgaagtt
gtggcagaagccgaaccgattgtgttggtacgcaatattttaaatgagcttgggctcaat
gatgtgcgtgtggagtggaacgctactgctcatcaagcagttttagaaggttatgtcgaa
gacagaacgcagaaactgcaactgctgggaagaatcgatgttctggggattaactacaaa
agtgacctaagaacgatggaagaaatccgccgaggcgtgcgcttcattcttcgtaacctt
ggctatcaccaagtgaaagtcgagaacggggatgaaactggcacgttgctgctgacgggc
tacatcgatgacgcgagcaaatggaaccaagtcgaacaaattttagaacgcgatgtaccc
ggtttggtcgcttggaaagtcgaactgcagcgtgcaggcgcgtacatggacacattaaaa
gagctgctcaccaacgcagagctgcttaaaaaagttcaattagtgacaagtggtgaccgc
attgaagtacgtggtgaattagacgacatcgaaaccacacgcttttacggcgtgactcgg
gattttcgtgagcagtatggtgaaaagccgtatctggttttgaaatcgattcccaaagtc
agcaaaggcacggacatcgacttcccgtttcgtagcgttaattttggccaagtgccgtac
gtcattcttaccgataacgttcgctacatggtaggggctcgcactccgcagggttatcgc
atatccagcgtaacgccagctgggattgagctggtgaaaggcgggcgcgttatcactatt
gaacttggatacgaaggcgagaaaaaccatgacaaatcttga

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