KEGG   Vibrio parahaemolyticus BB22OP: VPBB_1555
Entry
VPBB_1555         CDS       T02409                                 
Name
(GenBank) Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
  KO
K03219  type III secretion protein C
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VPBB_1555
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpb02044]
    VPBB_1555
Secretion system [BR:vpb02044]
 Type III secretion system
  Type III secretion core apparatus
   VPBB_1555
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0 FecR_C
Other DBs
NCBI-ProteinID: AGB10034
LinkDB
Position
1:complement(1753674..1755560)
AA seq 628 aa
MRTLMPKIGRIAAQMTLCALCVVPMFSVQATELNWPEQPFRYYADNDSLKDLLNNFGANY
RVSVSVSDKVNDRVSGRFTPEDPAEFLDYLAQVYNLMWYFDGAVLHVYKATETRSRLLQL
ELLTARELRSTLISTGVWDARYGWRAAENKGLVYLAGPPRYVELVVQTAEALESRLLQKS
NSTDELFVELIPLKYASATDRSISYRDQSITVPGIASVLSRVVGGVQTQITDSASVQTSP
VNGLPAEAAKPRGKTASVHGGATVEAEPGLNAIIVRDTQARLPLYRKLVAQLDQPQSRIE
VALSIVDISANDLRQLGVDWRAGVSVGNNRIVDIKTTGDVDNGDVTLGSGQNFKSLLDST
NLNYLLAQIRLLESKGSAQVVSRPTLLTQENVEAVLNNSSTFYVKLVGKETAALEEVTYG
TLLRIVPRIVGDRFATRPEINLSLHLEDGAKIPDGGVDDLPSVRKTEISTLATVKQGQSL
LIGGVYRDEVSHQLRKVPLLGDIPYLGALFRSNTNTTRRTVRMFIIEPRIVVDGIGDSVL
IGNEHDLRPSIGQLNNISNNSAEFKSVVEVFSCTSKTQAERYQQDLLSQQKSSLLTQCQL
PSGQVGWRVKVAECDLSQAECVRPSEEP
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgcgaactctcatgccaaaaatagggcgcattgccgcccaaatgacattgtgcgcactg
tgtgtcgttccgatgttttctgtacaagcgacagagctcaattggccagaacaaccgttt
cgttactatgccgataatgattcgttgaaagatctgcttaacaactttggtgccaactat
cgagtatccgtgtctgtgagcgacaaagtgaatgaccgagtgagtggtcgattcacgcca
gaagatccagcggagtttctcgactacctagcgcaagtttataacttgatgtggtacttc
gatggcgcagtactgcacgtttacaaagcgacagaaacgcgctcccgattgctgcaattg
gaactgcttaccgcgcgcgagcttcgcagtaccttgatttcaaccggtgtttgggatgct
cgttatggttggcgcgctgccgaaaataaagggctggtttatctagctgggccgccgcgt
tacgttgagttagtagtgcaaaccgcagaagcgttagagagccgattgctgcaaaagtca
aactcgacggatgagctgtttgtagaactcattccgcttaaatatgcctcggcgacggac
agaagtatctcgtatcgcgaccaaagcattaccgttccggggattgcttcggtattgagt
cgtgtggttggcggtgttcaaactcaaattacggattctgcgtctgtacaaacatcgcct
gtaaacggattacccgcagaagcagcgaaacctcgcggcaaaactgcgtctgtgcacggc
ggtgcaaccgtagaagcggagccggggctgaatgcgatcatcgttcgcgatacccaagca
agactgccgttatatcgcaagctggtcgctcaactcgatcagccacaatctcgtatcgag
gttgcgttatctattgtggacatcagcgcaaacgatttacgtcagctcggtgtggattgg
cgtgcgggtgtatcggttggaaacaaccgcattgtcgacatcaaaacaactggtgacgtt
gataacggtgatgtcacattgggcagtggtcagaatttcaagtccttgttggattccacc
aacttgaactacttgttggcacaaattcgtttattggaatcgaaaggcagtgcgcaagtc
gtttccagaccaacgctgctcacgcaagaaaacgtcgaagcggtgctaaacaacagcagc
acgttttacgtcaaattggttggcaaagagacggcggctttggaagaagtgacgtatggc
accttgttgcgcattgtgcctcgtatcgtcggcgacagattcgcgacgcgaccagagatc
aacttgagccttcatttagaagatggcgcaaagattccagatggtggtgtggatgatctc
ccatcggtacgtaaaaccgaaatcagtacgttagcgacggtaaaacaagggcaaagctta
ctcattggtggcgtataccgagacgaagttagccatcagctacgtaaagtcccgctgttg
ggcgacattccgtacctaggtgctttgttccgcagtaataccaacacaacgcgccgcaca
gttcgcatgttcattatcgagccgagaatcgtggttgatggcattggcgacagcgtgttg
ataggtaacgagcatgatttgcgcccgagtattggccagctcaacaacatttcgaacaac
agcgcagaatttaaatcggttgttgaagtattcagctgtacgtcaaaaacgcaggcagaa
cgttaccaacaagacttactgtcacagcaaaagtcctcgctgctaactcaatgtcaattg
ccgtccgggcaagtaggctggcgagtcaaagtggcggaatgtgacctttcacaggccgaa
tgtgttcgcccttcagaggagccataa

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