Vibrio parahaemolyticus BB22OP: VPBB_1635
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Entry
VPBB_1635 CDS
T02409
Name
(GenBank) Putrescine utilization regulator
KO
K14056
HTH-type transcriptional regulator, repressor for puuD
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpb03000
]
VPBB_1635
Transcription factors [BR:
vpb03000
]
Prokaryotic type
Helix-turn-helix
Other families
VPBB_1635
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_3
Cupin_2
HTH_31
HTH_19
HTH_26
HTH_37
Sigma70_r4
MqsA_antitoxin
AraC_binding
MPI_cupin_dom
MarR_2
HTH_92
HTH_24
HTH_25
AraC_binding_2
Cupin_3
Ribosom_S30AE_C
Ectoine_synth
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGB10111
LinkDB
All DBs
Position
1:complement(1842226..1842783)
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AA seq
185 aa
AA seq
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MDNHEIGKNIVQLRKKHGLSQRELAERAGITHSAISSIENGKVSPSVSSLQKIVNVFSLS
LSEFFIFEQSSNDEVKVVFKPSDLVEIGSETVSMKLVTNGDKDQVIGFLIEEYAPHGTTG
AAEIRHEGEEVGTILEGEITLEYKGQSYVLTAGESYIIDTTKPHRFTNHTDKACRLISAH
TPTTF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcatgagattggtaaaaatattgttcagttacgtaaaaaacatggattgtca
caaagggaattagccgaacgcgctggtattacccacagtgcaatctcgtccattgaaaat
ggcaaagtgagcccgtcggtcagctcattacaaaaaatcgtcaatgtattttctttatca
ctgtcggagtttttcatttttgaacaatcttcgaatgatgaagtgaaagtggtcttcaaa
ccgtcagatctcgtggaaattgggagcgagacggtatccatgaaactagtgacgaatggc
gacaaagatcaagttattggtttcttgatcgaagaatacgcaccacatggaacaacaggt
gcggcggaaatcagacacgaaggcgaagaggtcggcacgattttagagggagaaatcact
ctagagtacaaaggccaatcctacgtccttacagccggcgagtcgtacattattgatacg
acgaagccacatcgatttacgaatcacacagacaaggcttgtcgattgataagtgcgcat
acgccaaccacattttag
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