Vibrio parahaemolyticus BB22OP: VPBB_1773
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Entry
VPBB_1773 CDS
T02409
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpb03032
]
VPBB_1773
03400 DNA repair and recombination proteins [BR:
vpb03400
]
VPBB_1773
Enzymes [BR:
vpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VPBB_1773
DNA replication proteins [BR:
vpb03032
]
Prokaryotic type
DNA Topoisomerases
VPBB_1773
DNA repair and recombination proteins [BR:
vpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VPBB_1773
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF6674
ApbA
Motif
Other DBs
NCBI-ProteinID:
AGB10246
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Position
1:complement(1970844..1973480)
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AA seq
878 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIETEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLIARGWDLGNVA
AMLERAGTDAARPEWLEPQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILAEYKEL
LEEIAELMHILASTERLMEVIREELEAVRDGFADARRTEITAASHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEDGERITAILPVDEFSADKFIFMATGDGTVKKTSLD
QFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAGKVVRFSEDKVRAMGRTAAGV
RGMKLADDDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDE
VEEVELPEGEEEETTEANAEQQAPEAPAADDAEEGTEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tacctagactacgcgatgtcagttatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcacccacac
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcagccgttctcacttcgttac
atgctggtcgatggtcaaggtaactttggctcaatcgatggcgactctgctgcggcaatg
cgttacaccgaagtacgtatggcaaaaattgcccacgaacttttggctgacctagacaaa
gaaaccgtagactacgtacctaactatgatggtacagaacagattccagcggttcttcca
accaaaattccaaacctattggtcaacggtgcttctggtatcgcggtaggtatggcaacc
aacatcccgccacataaccttggcgaagtgatcgatggctgtcttgcatacatcaataat
gaagaaatcactattgatgaactaatggattacatccctggtccagatttcccaactgcg
gcgcttatcagcggtcgtaaaggcattgtagacgcgtacaaaacaggtcgcggtaagatc
tacatgcgttcaaaagcggaaatcgaaacagagaaaaacggtaaagaaaccatcatcgtt
accgaaattccttaccaagtgaacaaagctcgtctgatcgagaagattgctgaacttgtt
aaagataagaaagttgaaggcatcagtgcgctacgtgacgaatctgacaaagatggtatg
cgtatcgttattgaatgtaagcgtgatgcagtaggcgaagtggttcttaacaacctttac
gctcaaactcagctacaaacgactttcggtatcaacatggttgcgctgaacaatggtcag
ccacagctattcaacctgaaagatatgttgaagtgctttgtggatcaccgtcgtgaagtt
gtgactcgccgtactatcttcgaattgcgtaaagctcgtgagcgtgcgcacattcttgaa
ggtcttgcacttgctctagcgaacatcgatgaaatcatcgacctaattcgtaaagcgccg
actcctgctgaagcaaaagctggtcttattgctcgtggttgggatctaggtaacgtagca
gcaatgcttgagcgtgctggtactgatgcggctcgcccagaatggctagagcctcaatac
ggtatccgcgacggtcaatacttcctgactgaacaacaagcgcaagcaattctagatctg
cgtctacataaattgaccggtctagaacacgagaagattcttgctgaatacaaagagctt
ctagaagaaatcgctgagttaatgcacattcttgcaagcactgagcgtttgatggaagtg
attcgtgaagaactagaagcagttcgtgacggatttgctgatgcacgccgtactgaaatc
acagcagctagccatgacatcgacatggaagagctgattgctcgtgaagacgtagtcgta
actctatctcacgaaggttacgttaagtaccaaatcctaagcgactacgaagcacagcgc
cgtggtggtaaaggtaagagtgcaactcgaatgaaagatgaagactacattgaacgtctt
ctagtggcgaatacccacgacaacattctatgtttctctactcgcggtaagacttaccgt
ctgaaagtttaccaattgccactagcgagccgtactgcacgtggtaaaccgatcgtgaac
atccttccactagaagatggcgaacgtatcactgcaattcttccggttgatgagttctca
gcagacaagttcatcttcatggcaactggcgacggtaccgttaagaagacttctctagac
cagtttgcgaacgtacgttcaaacggtctaattgcggtgaacctacgtgatgacgattct
ctaatcggcgttgatatcacaacgggttcaagcgacatcatgctgttctctaaagcaggt
aaagttgttcgctttagcgaggacaaagtacgtgcaatgggtcgtacagcggcaggtgtc
cgtggtatgaagctggctgacgacgaccaagtggtttcactaatcgttccgtctaacgaa
ggcgacatcctaacggttactcaaaacggttacggtaaacgtaccgaactggctgaatac
ccaacgaaaggtcgtgcaactcagggcgttgtgtctatcaaggtttctgagcgtaacggt
ccagtagttggtgcagtgcaagtagaagaaggcgacgagatgatgatgatcaccgacgct
ggtactctggttcgtacgcgtgtagcagaagttagccaagtaggccgtaacactcaaggt
gtaacgctgatccgtacagcagaagacgagtcagttgttggtctacaacgtatcgatgaa
gttgaagaagtggaattgccagaaggcgaagaagaggaaacaacagaagcgaatgcagaa
cagcaagctcctgaagcgccagcagcagacgacgcggaagagggcacagaagagtaa
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